Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0060 ATGGAGAAGGTGTTGAGGATGAGGACAACAGTGGTGGCTCTAATACTGTGGTGTGTAACAGTAAGTGAGAGAGGGGAGGGGCTGATAAAGCTGCCAGGAAATGAAACAGTGCCAGGCCTCATCATATTTGGGGATTCAATAGTGGACACTGGCAGTAACAATGACCTCTCAACACCAGCCAAATGCAACTTTCCTCCTTACGGCAGGAATTTCCTGGGTGGCACCCCTACCGGAAGATTCTCTAATGGCAAAGTCCCTTCTGACTTCTTAGTGCAAGAATTGGGCATCAAGGAATACGTACCTCCCTACAGGCACTCTAACTTGCACCCCAATGATCTTTTTACGGGAGTAAATTTCGCTTCTGGTGGCTCAGGATACGATCCTTTGACCCCAAGTATTCTGTCAGTGATATCATTATCAGATCAACTGCAACAATTCAAAGAGTACATAGGAAAGGTGAAAGAAAATTTTGGAGAAGAAAAAACAAGTTTCATGTTATCAAAAAGTTTAGTACTTGTGGTAGCAAGCAGCAACGACATTGCGAACTCTTACTTCGCAACCGGAATCAGGAGAATGCAATATGATATTCCCTCTTACACTGATCAGTTGATGCACTATGCCTCTACTTTCATTCAGGAATTATATGGATTGGGGGCAAGGAGAATCGGAGTGTTCAGTGCACCCCCACTGGGATGCTTGCCTTCCCAGAGAACAATTTTTGGAGGACTAGGGAGAGAGTGCTCGCGAGACACAAACATGGCATCTCAATTGTTCAATGCAAAACTATCTGCAGAGCTGGACTCCCTAAACCACAATCTGCCTCAAGCCAAGTTTGTGTATATTGATGTTTACGACCCTCTGCTTCATATCATCAATAACCCAACCAAATATGGGTTTGAAGTAGCTGACAGAGGATGCTGTGGGACAGGGACTTTAGAGGTATCGGTGCTGTGTAATCGGCTACATCCCCAGACGTGCGCAGACGAGTCGAAGTATGTGTTTTGGGATAGCTACCATCCCACCGAAAGAACATACCAAATTCTTGCTGACTTAGTTCTCAACACATACATTACCAGCTTCTTCTGA 1086 0.4494 MEKVLRMRTTVVALILWCVTVSERGEGLIKLPGNETVPGLIIFGDSIVDTGSNNDLSTPAKCNFPPYGRNFLGGTPTGRFSNGKVPSDFLVQELGIKEYVPPYRHSNLHPNDLFTGVNFASGGSGYDPLTPSILSVISLSDQLQQFKEYIGKVKENFGEEKTSFMLSKSLVLVVASSNDIANSYFATGIRRMQYDIPSYTDQLMHYASTFIQELYGLGARRIGVFSAPPLGCLPSQRTIFGGLGRECSRDTNMASQLFNAKLSAELDSLNHNLPQAKFVYIDVYDPLLHIINNPTKYGFEVADRGCCGTGTLEVSVLCNRLHPQTCADESKYVFWDSYHPTERTYQILADLVLNTYITSFF 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0060 361 SUPERFAMILY SGNH hydrolase 39 356 - -
Dere04g0060 361 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 IPR008265 GO:0006629|GO:0016298
Dere04g0060 361 Gene3D SGNH hydrolase 30 358 IPR036514 -
Dere04g0060 361 Pfam GDSL-like Lipase/Acylhydrolase 41 351 IPR001087 GO:0016788
Dere04g0060 361 PANTHER GDSL ESTERASE/LIPASE EXL3 17 350 - -
Dere04g0060 361 FunFam GDSL esterase/lipase APG 29 357 - -
Dere04g0060 361 CDD SGNH_plant_lipase_like 38 356 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0060 Dere-ChrDere04 688587 690430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0060 34 349 Pollen Coat Proteome AT1G75910 40.439 1.19e-74 233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0060 04 688587 690430 Dere04g0060 04 688587 690430 ECH