Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0059 ATGGGAGCCCCTGCACTCTGCATGCTCATGTCCTTTCTGTTCCTGATAGCTGTTGAAGCTCGACCTCAGAATGTAAATGATAACAATAACCGCAATAGCGATGCATCAGATTCAGATGTGTATATCGTGTACATGGGAGCCGCCGATTCCTCCAATGCTTCCCTTCGCAACGATCATGCTCAGCTTCTAAGCTCAGTAATCAGAAGGGATGAGAAGGCTCTGCTACACAACTACATACATGGATTCTCAGGGTTCGCTGCTCGTTTATCCCAAGAGGAGGCACGCTCTATCTCTAACAAACCTGGGGTGGTGTCTGTGTTCCGGGATCCTGTTTTGAAGCTGCACACCACTCGTTCCTGGGATTTCCTCAGGTATCAGACTCAAGTCAAAATCGACTCCACTTCTTCTTCCTCCTCTGACACTATCGTTGGCATCTTAGACACAGGGATATGGCCTGAGTCGGCGAGTTTTTCTGACAACGGCATGGGTCCGGTTCCGTCCCGGTGGAAAGGTACCTGCATGACAGCCCAAGACTTCAATTCCTCCAACTGTAACAGGAAGCTCATAGGAGCGAGGTACTACAAGGGCGGAGGGGATGACTCAGCAAGGGATACCTTAGGGCACGGCACCCACGTGGCATCCACAGCGGCGGGGAGCACCGTCGGTGATGCATCTTACTATGGTCTGGCGGCAGGCAGCGCAAAGGGTGGGTCCCCTGCCTCCAGGCTGGCAGTATATAGAGTGTGCTCCATCTTTGGCTGTCGTGGCTCTACCATTCTTGCTGCCTTCGACGACGCCATTGCCGACGGAGTTGACGTCCTCTCTCTCTCCCTGGGTTCCCCCTCCTCAGTCCGACCCGATTTGACTTCGGATCCCATTGCCATCGGAGCCTTCCATGCCGTGGAGAGAGGCATCACCGTCGTCTGCTCCGCAGGCAATGATGGCCCCGACACCAACACCGTCGCCAACGATGCTCCTTGGATTTTGACTGTCGCTGCTACCACCATCGACCGCGATCTCCAGTCGAACCTTGTTTTACCTGCTAACGTACTCATCAAGGGGGAGGGCATTAATTTCTCTAATCTTTCGAAATCCCCCGTTTATCCATTGATATATGGTGAATCCGCCAAGGCAGCAAACGCCAACATAGCTGAAGCAAGACAATGCCACCCGGATTCGTTGGATGGGAATAAAGTGAAAGGGAAGATTGTAGTATGCGATGGCAAAGATGATCCATATTCGACGAGTGAAAAGATTGAGACGGTGAAAGAGGTTGGAGGAGTAGGCGTGGTTAATGTGGATGATAGTACTATATCTGTGGCATCTAACTATGGTGCCTTTCCAGCCACTGTGATAAGTTCAAAAGATGCGGCTACACTTCTCCAATATCTCAATTCAACCAGCAACCCAGTGGGCACCATTTTACCAACAGTTTCAGTCAGTAATTATAAGCCAGCACCACAAGTAGCATACTTCTCCTCAAGAGGGCCTTCCACCTTTTCCAAGAACATTCTCAAACCTGACATCGCAGCACCAGGAGTAGCAATACTGGCAGCATGGACTGGGGATGACACAGAAGAGGCACCAAATGGAAAGAAGGCATCGCCATTCAACCTCATCTCAGGGACTTCCATGGCATGTCCTCATGTTTCAGGGGTTGCCGCCACTGTCAAGTCTCAGAACCCCACTTGGACTCCCTCTGCTGTCAAATCTGCCATCATGACCACAGCAATTCAGAAGAACAATATCAAGGGTCCAATAACAACGGATTCAGGATCAGTGGCCACACCTTATGACTTTGGGGCAGGGGAAGTCTCACCATCAGCGCCATTGCAAGCAGGCCTTGTTTACGAAACCACCACCACTGATTACTTGAACTACCTCTGTTACATTGGCCTTAATATCTCCACCATTAAGGTCATCTCCAGGACTGTCCCAAATGGTTTCGCTTGTCCTAAAGATTCCACTTCTGATTATGTCTCAAACATCAACTACCCTTCCATAGCAATCTCCAACTTCAACGGTAAAGGGACTAACAAAGTAACCAGAACCGTCACAAACGTTGGTGAAGATGGCGAAACTGTGTACTCCTCAGTTGTGGAGGCCCCAAGCGGTGTGGATGTGAAGGTAATTCCGGACAAACTGCAATTCACCAAGAGCAGTAAAACACTAAGCTATCAGGTTAGCTTCTCCTCCACTTCAACCGCCTCTTCGAACGAGGCTGTCTTTGGATCCATTGCGTGGTCTAACGGTAAATATTCTGTTCGAAGTCCTTTTGTATTAACAAAGTAG 2292 0.4987 MGAPALCMLMSFLFLIAVEARPQNVNDNNNRNSDASDSDVYIVYMGAADSSNASLRNDHAQLLSSVIRRDEKALLHNYIHGFSGFAARLSQEEARSISNKPGVVSVFRDPVLKLHTTRSWDFLRYQTQVKIDSTSSSSSDTIVGILDTGIWPESASFSDNGMGPVPSRWKGTCMTAQDFNSSNCNRKLIGARYYKGGGDDSARDTLGHGTHVASTAAGSTVGDASYYGLAAGSAKGGSPASRLAVYRVCSIFGCRGSTILAAFDDAIADGVDVLSLSLGSPSSVRPDLTSDPIAIGAFHAVERGITVVCSAGNDGPDTNTVANDAPWILTVAATTIDRDLQSNLVLPANVLIKGEGINFSNLSKSPVYPLIYGESAKAANANIAEARQCHPDSLDGNKVKGKIVVCDGKDDPYSTSEKIETVKEVGGVGVVNVDDSTISVASNYGAFPATVISSKDAATLLQYLNSTSNPVGTILPTVSVSNYKPAPQVAYFSSRGPSTFSKNILKPDIAAPGVAILAAWTGDDTEEAPNGKKASPFNLISGTSMACPHVSGVAATVKSQNPTWTPSAVKSAIMTTAIQKNNIKGPITTDSGSVATPYDFGAGEVSPSAPLQAGLVYETTTTDYLNYLCYIGLNISTIKVISRTVPNGFACPKDSTSDYVSNINYPSIAISNFNGKGTNKVTRTVTNVGEDGETVYSSVVEAPSGVDVKVIPDKLQFTKSSKTLSYQVSFSSTSTASSNEAVFGSIAWSNGKYSVRSPFVLTK 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0059 763 Pfam Fibronectin type-III domain 662 760 IPR041469 -
Dere04g0059 763 ProSitePatterns Serine proteases, subtilase family, histidine active site. 208 218 IPR022398 -
Dere04g0059 763 Gene3D - 628 763 - -
Dere04g0059 763 CDD Peptidases_S8_3 112 578 IPR034197 -
Dere04g0059 763 Gene3D Peptidase S8/S53 domain 140 624 IPR036852 GO:0004252|GO:0006508
Dere04g0059 763 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 115 IPR037045 -
Dere04g0059 763 ProSiteProfiles Serine proteases, subtilase domain profile. 119 611 - -
Dere04g0059 763 FunFam Subtilisin-like protease SBT1.5 140 347 - -
Dere04g0059 763 Gene3D - 337 481 - -
Dere04g0059 763 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Dere04g0059 763 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Dere04g0059 763 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Dere04g0059 763 Pfam Subtilase family 139 603 IPR000209 GO:0006508|GO:0008236
Dere04g0059 763 Pfam PA domain 369 460 IPR003137 -
Dere04g0059 763 Pfam Peptidase inhibitor I9 40 115 IPR010259 -
Dere04g0059 763 SUPERFAMILY Subtilisin-like 114 615 IPR036852 GO:0004252|GO:0006508
Dere04g0059 763 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Dere04g0059 763 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 760 IPR045051 -
Dere04g0059 763 CDD PA_subtilisin_like 343 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0059 Dere-ChrDere04 679324 682644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0059 32 762 Subtilisin-like Serine Gene Family AT1G20150 54.244 0.0 800