Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere04g0024 ATGGCTGCGGGAACGGATTTTTCTCCTCCTTTTACCATATTAGAAGGCACTCAAGGCAGTTACAGCAAAGACAATGCATCCGTCATGGAAGATGACAAATCCAGATATTTGAACAAACTGAAACAAATGACAATTGGTAAACCTCCACGGAACCTCTCCCACATGAGACATAGCATTAGCTCTACAAGGTTGCTAGCTACAGCAGAGTTGAGTTTTGATGCGGGGGTTGTTGGGAGTAAATCATCTTCTGACGAGAAGGCAGAGTTTCTCCCCATATATCGGTCAGGAAGCTGCGGTGAAATAGGTCCTAAACAGTACATGGAAGATGAACACATCTGTGTTGATAATCTTATTGAACATCTAGGTTCAGTTTCAGATATCCCTCCTCATGGAGCATTCTATGGGGTGTTTGATGGTCATGGTGGGACTGATGCAGCTGCATATATAAGAAATAACATCCTCAAATTTATAGTTGAGGACCCTCATTTTCCTACGTACCTGGAAAAGGCAATTAAAAGTGCCTTTCTGAAAGCTGATTATGCATTTGCAGATGCTAGTTCCCTTGATATCTCCTCTGGCACCACTGCTTTAACTGCACTTGTATTTGGAAGGAGCCTGATAGTTGCAAATGCGGGGGATTGTCGGGCTGTACTGGGGAGGCGAGGTAGAGCAATAGAGATGTCAAAAGACCACAAACCAAATTGCAAGTCAGAAAGAGTAAGAATTGAGAAACTTGGTGGGGTGGTATATGATGGATACCTGAATGGTCAGTTATCTGTTGCGCGTGCCTTAGGAGACTGGCACATGAAGGGTCCTAAGGGTTCTGCCTGCCCTTTAAGTGCAGAACCAGAGTTGCAGGAAATCCTCTTGACTGAGGATGACGAATTCTTGATTATGGGATGTGATGGTCTCTGGGATGTTATGAGCAATCAATGTGCCGTGACCATGGCAAGGAGAGAATTGATGCTACATAATGATCCCGAAAGGTGTTCAAGAGAGCTTGTGAGAGAGGCTCTTAAGCGCAACACGTGTGATAATTTGACTGTTATCGTGGTGTGTTTCTCCCCAGACCCTCCTCCTCGGATAGAGCTACCTCCATCCCGGGTTAGGAGGAGCATTTCTGCGGAAGGGCTCAATTTACTCAAGGGTGTACTAGATTGTAACTCATGA 1170 0.4504 MAAGTDFSPPFTILEGTQGSYSKDNASVMEDDKSRYLNKLKQMTIGKPPRNLSHMRHSISSTRLLATAELSFDAGVVGSKSSSDEKAEFLPIYRSGSCGEIGPKQYMEDEHICVDNLIEHLGSVSDIPPHGAFYGVFDGHGGTDAAAYIRNNILKFIVEDPHFPTYLEKAIKSAFLKADYAFADASSLDISSGTTALTALVFGRSLIVANAGDCRAVLGRRGRAIEMSKDHKPNCKSERVRIEKLGGVVYDGYLNGQLSVARALGDWHMKGPKGSACPLSAEPELQEILLTEDDEFLIMGCDGLWDVMSNQCAVTMARRELMLHNDPERCSRELVREALKRNTCDNLTVIVVCFSPDPPPRIELPPSRVRRSISAEGLNLLKGVLDCNS 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere04g0024 389 SUPERFAMILY PP2C-like 89 355 IPR036457 -
Dere04g0024 389 SMART PP2C_SIG_2 109 354 IPR001932 -
Dere04g0024 389 SMART PP2C_4 84 352 IPR001932 -
Dere04g0024 389 ProSitePatterns PPM-type phosphatase domain signature. 133 141 IPR000222 GO:0043169
Dere04g0024 389 ProSiteProfiles PPM-type phosphatase domain profile. 94 354 IPR001932 -
Dere04g0024 389 PANTHER PROTEIN PHOSPHATASE 2C 78 352 IPR015655 GO:0004722|GO:0006470
Dere04g0024 389 CDD PP2Cc 93 354 IPR001932 -
Dere04g0024 389 Pfam Protein phosphatase 2C 102 346 IPR001932 -
Dere04g0024 389 Gene3D - 76 357 IPR036457 -
Dere04g0024 389 FunFam Probable protein phosphatase 2C 22 79 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere04g0024 Dere-ChrDere04 331066 332868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere04g0024 6 386 PP2C-type Phosphatase Gene Family AT2G33700 73.107 0.0 563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere04g0024 04 331066 332868 Dere04g0024 04 331066 332868 ECH