Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2736 ATGGGTGGGTGTTTTCCTTGTTTTGGATCATCCAACAAGGAGGACAGTGGGTTGAAGGGAGTGGTCAAGAAGGATTCTTTTAAAGAAGGTTCGGCTGCTCAGTCTCATCACGTCAATAGGATCATCTCAGATAAATCAAAATCAAGAAGTGGCTCTGATCCCAAGAAGGAACCACCAGTTCCAAAGGATGTACCAACTGCCCACATTGCTGCCCAAACTTTTACATTTCGAGAGCTTGCAGCTGCTACAAAGAATTTTAGGCCTGAATGTTTATTAGGTGAAGGAGGTTTTGGGCGTGTTTACAAAGGCCGCCTTGAAAGCACAGGGCAAGTAGTTGCCGTAAAACAGCTTGATCGCAATGGCCTCCAAGGAAATCGAGAGTTTCTGGTGGAGGTTCTCATGCTTAGCCTCTTACATCACCCAAATCTTGTGAACTTAATTGGTTATTGTGCTGATGGGGATCAGCGGCTGCTTGTCTATGAATTTATGCCATTGGGGTCTTTGGAGGATCATTTACATGATCTTCCTCCTGACAAGGAGCCCCTGGACTGGAACACAAGGATGAAAATAGCAGCTGGAGCAGCAAAGGGGTTGGAATATTTGCATGACAAAGCAAACCCCCCTGTGATATATAGAGACTTAAAATCATCCAACATCCTCCTAGATGAGGGTTATCATCCCAAGTTATCAGATTTTGGGCTAGCAAAACTTGGTCCTGTTGGTGATAAGACTCATGTATCCACACGAGTAATGGGAACATATGGTTATTGTGCCCCAGAATATGCTATGACTGGCCAACTAACTCTAAAGTCTGACGTCTACAGTTTTGGAGTTGTCTTCCTGGAACTTATTACTGGGCGCAAGGCTATTGATAACTCACGTGCACCTGGAGAGCATAATCTCGTAGCATGGGCACGACCCTTATTTAAAGACCGTAGGAAGTTCCCCAAAATGGCTGATCCTCTGCTTCAAGGCCGTTATCCAATGCGAGGACTCTATCAAGCACTTGCAGTTGCAGCTATGTGTTTGCAGGAACAAGCTGCTACAAGGCCGCTTATTGGAGACGTTGTAACTGCTCTTACATACTTGGCCTCACAGACATATGACCCAAATGCGGCCAGTCAGACTAACCGAGTTGGTCCATCAACACCTAGGAACAAGGAGGATCGAAGGAACACGACAGATAGCTTGGACAGCCCAGATCATGGCCGTCATCATGGTTCACCTTCCACCTATAAAAACTCACCTGATTACAGGAAGAGAGATGGTAGGGATCCAAATGCTGGGACTGACTTACAGAGGACTGAAACTGGTGGTGGGTCAGGGAGAAGATGGGGATTGGATGATGTAGAAAGACATGAATCTCAGAGAGACAGCCCAGTAAATACTGGAAGAGCTAGGGAAATTCCAAGGAACCGGGACCTAGACAGAGAGCGTGCAGTTGCAGAAGCTAAAGTATGGGGTGAGAATTGGAGAGATAAAAAACGGGCGAATGCAATGGGTAGCTTCGATGCTACAAATGAGTGA 1527 0.4617 MGGCFPCFGSSNKEDSGLKGVVKKDSFKEGSAAQSHHVNRIISDKSKSRSGSDPKKEPPVPKDVPTAHIAAQTFTFRELAAATKNFRPECLLGEGGFGRVYKGRLESTGQVVAVKQLDRNGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKSSNILLDEGYHPKLSDFGLAKLGPVGDKTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGVVFLELITGRKAIDNSRAPGEHNLVAWARPLFKDRRKFPKMADPLLQGRYPMRGLYQALAVAAMCLQEQAATRPLIGDVVTALTYLASQTYDPNAASQTNRVGPSTPRNKEDRRNTTDSLDSPDHGRHHGSPSTYKNSPDYRKRDGRDPNAGTDLQRTETGGGSGRRWGLDDVERHESQRDSPVNTGRAREIPRNRDLDRERAVAEAKVWGENWRDKKRANAMGSFDATNE 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2736 508 Pfam Protein kinase domain 91 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2736 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 209 221 IPR008271 GO:0004672|GO:0006468
Dere03g2736 508 MobiDBLite consensus disorder prediction 28 64 - -
Dere03g2736 508 ProSiteProfiles Protein kinase domain profile. 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2736 508 MobiDBLite consensus disorder prediction 415 429 - -
Dere03g2736 508 SUPERFAMILY Protein kinase-like (PK-like) 72 377 IPR011009 -
Dere03g2736 508 Gene3D Phosphorylase Kinase; domain 1 60 162 - -
Dere03g2736 508 FunFam Serine/threonine-protein kinase PBS1 60 162 - -
Dere03g2736 508 MobiDBLite consensus disorder prediction 40 62 - -
Dere03g2736 508 MobiDBLite consensus disorder prediction 371 477 - -
Dere03g2736 508 FunFam Serine/threonine-protein kinase PBS1 163 378 - -
Dere03g2736 508 SMART serkin_6 86 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2736 508 PANTHER OS07G0668900 PROTEIN 4 372 - -
Dere03g2736 508 MobiDBLite consensus disorder prediction 445 461 - -
Dere03g2736 508 Gene3D Transferase(Phosphotransferase) domain 1 163 380 - -
Dere03g2736 508 MobiDBLite consensus disorder prediction 383 408 - -
Dere03g2736 508 CDD STKc_IRAK 92 361 - -
Dere03g2736 508 ProSitePatterns Protein kinases ATP-binding region signature. 92 115 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2736 Dere-ChrDere03 42889227 42899265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2736 66 365 Glycoside Hydrolase AT3G07070 75.333 4.94e-169 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Dere03g2736 Pkinase 1e-45 CL0016