Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2729 ATGGATGAGAAGAATAAAGAAATTGATTTTCACATGTTCACGGATAATTATCAGAGGCTCCCCACGGGGGAACTTGGCTATGGAAACTGCGGAGTGCCACGGCGACCGGAGAGTGAAATCAAGCAGTGCACCCTAGACAACAAAAGATCGGTGCGTTGCTGGTTGCCGCCGGAGTCGAAGGTGGCCTGCTGTAGCTGCCAGCTGCAATGCTGCGTATCCAAGAAGCCTGGGGAAAAAGATGGTGCCTGGGACTTTGTTTTTGCTTTGCGTTTCTGGGCTTCCGCTGTATTGTTATGGGGAACTAGGGTTGCGTTGGGAGGTTTTCAGGGGCCTCACCGATTGCCAATATTCTACTGCCAATTACGGTGTGAGTCTACTACGTTACTGAGCATGGCTTTTTTTCATTGTTATCGTGACGCCGTGCTTTATCTGAATCGTATTGCGACAACCTCACCCACCTCAAATCTCTGCTTCTCCATCGCATATCGCAACACATCACCATTCTCTTTGAAATACTGCACAAGCACTTCCGATTCGCTGTCATTTACGGTGAACTATCTCATAACCAGTGTGGGGTTCTCACCAGAAACCGCTTCCAAAGTCTCTAAGCGAGTTCGTTTTGAGAAACCAGAAAAGCCGGACTCGGTGCTTGCCATGTTTAGAAAATACGGCTTCTCTGACTCTCAGATCGCCAGCATCATCGAGTTTCGACCACCTGTGATTGTGGCCGATGCTCAGAAATCCATTCTTCCCAAATTAGAGTTTCTTCGGTCTAAGGGTGCTTCGAGGTCCGATCTTGTCCACATTGTGACTTCGAGTCCGAGATTCCTATTCCGAAGCTTAGAGAATTGCGTGGGGCCTTGTTATGCTTTTTTGAAGCGATTTCTTCAGTCTGATGAACGAACAATTGGATACATAAAGCGCCGCGCGTCTTTGATTTCTGAGTCTCGGATAGCAGATAATATTACATTGTTGCTTGATAATGGAGTGCCTGAATCCAAGATTACTATTTTACTCTTAAGAACGCCTCTCTCGCTCAACATACAACCTGAATCCTTTAAGAAGGCAGTGGAGGAAGTGAAGGAATTGGGATTCAGCCCTACGACAACAGATTTTGTCCTAGCATTGCACATCAAAATTGTATTGAGCGAATCCGCGTGGAAAAGGAAGATTGATTTCTACAAGAGATGGGGTTGGTCTGAAGACGTGGTTGTTTCAGCATTTGTAAGGCGTCCGTGGTGCATGCTGGTATCTGAGCATAAAAGTGACGAAATTATGGAATTTTTTGTTACCCATTTGGGCTGGGATTCTGTGGAGCTAGCAAAGCGTCCACAACTATTCTCATTCAGTTTGCAGAAAAGAATCTTACCAAGAGCTTCCGTTATACAGTTTCTCCAATCAAAAGGGTTGATTTGTAAGAAAGCTAGATATTTTGCTGCATATGCTATGCCTGAAAAGTTATTCCAGGAGAAGTTTGTGGATTGCTTTAAGGAAAAAACTCCTCAGCTTTTGAAGATGTATGAAGAAAAAAAACAGAATATTTCAAATAAATGA 1554 0.4453 MDEKNKEIDFHMFTDNYQRLPTGELGYGNCGVPRRPESEIKQCTLDNKRSVRCWLPPESKVACCSCQLQCCVSKKPGEKDGAWDFVFALRFWASAVLLWGTRVALGGFQGPHRLPIFYCQLRCESTTLLSMAFFHCYRDAVLYLNRIATTSPTSNLCFSIAYRNTSPFSLKYCTSTSDSLSFTVNYLITSVGFSPETASKVSKRVRFEKPEKPDSVLAMFRKYGFSDSQIASIIEFRPPVIVADAQKSILPKLEFLRSKGASRSDLVHIVTSSPRFLFRSLENCVGPCYAFLKRFLQSDERTIGYIKRRASLISESRIADNITLLLDNGVPESKITILLLRTPLSLNIQPESFKKAVEEVKELGFSPTTTDFVLALHIKIVLSESAWKRKIDFYKRWGWSEDVVVSAFVRRPWCMLVSEHKSDEIMEFFVTHLGWDSVELAKRPQLFSFSLQKRILPRASVIQFLQSKGLICKKARYFAAYAMPEKLFQEKFVDCFKEKTPQLLKMYEEKKQNISNK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2729 517 PANTHER CGI-12 PROTEIN-RELATED 179 497 IPR003690 GO:0003690|GO:0006355
Dere03g2729 517 FunFam Mitochondrial transcription termination factor-like 281 500 - -
Dere03g2729 517 Gene3D Transcription termination factor 3, mitochondrial 280 506 IPR038538 -
Dere03g2729 517 Pfam mTERF 380 475 IPR003690 GO:0003690|GO:0006355
Dere03g2729 517 Pfam mTERF 217 368 IPR003690 GO:0003690|GO:0006355
Dere03g2729 517 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Dere03g2729 517 SMART mt_12 405 436 IPR003690 GO:0003690|GO:0006355
Dere03g2729 517 SMART mt_12 336 366 IPR003690 GO:0003690|GO:0006355
Dere03g2729 517 SMART mt_12 437 471 IPR003690 GO:0003690|GO:0006355
Dere03g2729 517 SMART mt_12 370 400 IPR003690 GO:0003690|GO:0006355
Dere03g2729 517 SMART mt_12 231 262 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2729 Dere-ChrDere03 42693966 42696422 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere03g2729 mTERF 5.9e-24 No_clan