Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2724 ATGTCCAGCTCTAGAACCCCAGAAAATCAAATCCAGATGGGTCTGTCTCTTCTGAAAAGAAACCCATCTCCTTGTGGTGAGAGAAGAGGGAGAAGAAAGCAGGTAGAAGCAGGGAGGTTTCTTGGGGTGAGGAGGAGACCTTGGGGAAGATATGCTGCTGAAATTAGAGACCCTGCTACTAAAGAAAGGCATTGGCTTGGCACTTTTGATACTGCTCAAGAAGCTGCTTTAGCTTATGACAGAGCTGCTCTGTCCATGAAAGGAAGCCAAGCTAGAACCAACTTCATATACTCTGATAATGCCACTTTTGACACTCTTATTTATCCTTTCGATGTTCAACTTCAACCGCTGTTTAATACTATTCAGAGCAAACAATCAGCCAATCAGATCAGCCCACCTCAGCTTTTTGAAACTTCCCCCATTGTGAGCACTGCACGTGATTCTTCAGCTCTGGAGGATGATAGTTTGTTCTTCCTCTCCAGTGATAATTCTAACTCAGGATACCTGGAATGCATAGTTCCTGATATTTGTTTCAGACCTTCTTCTTCTTCTTCCAATAATACCAACAGTCCAAACTCCAGGAAGAGCAGCAATGCCTTTATTGCCAGTGCTGCTTCAACTGAGCATAAGGTATCTCAAGAAGCTGTGATAAACATGCCAGCATTAATGGCATCTAGCTTTGGAGAATTTTCTTATCCGAATGAACTTGGTCAAGAAGCAATGTGGGGCAATCATCATCTTCAGAAGCCATGGGATTGGAACTGCAGTGAACTTTCAGCCATATTCAACAATCCATTAAGGGTTAAAGATACAGACAGTTCAAGCTGTGGGATAATAACTCAAGCTGCTTCTTCGTCAACCACCTATTCTCCATCACTTCCTTCTTTTGGAGACGTCGATTTGGGATACTCACTCTTCTGA 921 0.4311 MSSSRTPENQIQMGLSLLKRNPSPCGERRGRRKQVEAGRFLGVRRRPWGRYAAEIRDPATKERHWLGTFDTAQEAALAYDRAALSMKGSQARTNFIYSDNATFDTLIYPFDVQLQPLFNTIQSKQSANQISPPQLFETSPIVSTARDSSALEDDSLFFLSSDNSNSGYLECIVPDICFRPSSSSSNNTNSPNSRKSSNAFIASAASTEHKVSQEAVINMPALMASSFGEFSYPNELGQEAMWGNHHLQKPWDWNCSELSAIFNNPLRVKDTDSSSCGIITQAASSSTTYSPSLPSFGDVDLGYSLF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2724 306 SUPERFAMILY DNA-binding domain 40 97 IPR016177 GO:0003677
Dere03g2724 306 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Dere03g2724 306 FunFam Ethylene-responsive transcription factor 2 39 97 - -
Dere03g2724 306 CDD AP2 39 95 IPR001471 GO:0003700|GO:0006355
Dere03g2724 306 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Dere03g2724 306 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Dere03g2724 306 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 25 207 - -
Dere03g2724 306 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Dere03g2724 306 Pfam AP2 domain 42 88 IPR001471 GO:0003700|GO:0006355
Dere03g2724 306 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2724 Dere-ChrDere03 42641616 42642536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2724 1 264 AP2-EREBP Transcription Factor Family AT5G18560 36.364 2.18e-51 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere03g2724 AP2 2.6e-12 CL0081