Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2704 ATGCATTCGATCTTTGTAAATACTTCTTCTTATCATATGTGTAGCACTGATGTTGTTAGTTTTGACAACAGGCTCCTTATTAACGGGGGGAAAAGCATGCTTGGTCCTGAAGGAGAGCTTAACATAAGTTTTGGCTATCAGTGCAATAGTGATAGAGATGCCTCTTCTGATTTGATCAGCAGCTACAAAATCCTGCCCAAAGTCCGTAGGACAAGCAGCTTCTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCTACGTTAGCCAACACCAGCATCTGCGATGGTGTGATAGGAGAAGAGATCCTTTCCACCTGGGACTCTCCTAATACATTTCGTAAGGTACCCTCTTTATCAAGCCTTTCGAGGTTGGATATATTGTCATCTTCTCTCCCAAATAGTTTGTCAAACTTAAGTTGCAGTCCATCCACTCCAAGTGATGTGCTTGAATATGACTCTTGTCCATTAAAATCCATGATTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGCTTTAGAAGTACAAGTAGCAGGAGGAGCTGCCTGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAACAAAATGGATGGCTGTTTTGTGCAATTTATGATGGCTTTAATGGCAGAGATGCTGCCGACTTTCTGGCGGGTACTCTGTTTGACACCATTTCATCTTATTTTAGTAAGTTGTATTTGGAACTGGATACAGATTCCATCAGTGCTTCTAACAATATGAATTTGGATGGATCATTCCAACATAAGTTGGATGATAGTGTTAATAATAGTGATGGACAATCTGTATCGAAATGGGGGATTAAGAGTAGTTCTGCTAAGGTAGACCCATTGTGTAAATCATTTTCTCATGGGGTACTTGATAGCCTCCAGCGTGCTCTTAGTCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGATCCTCCGGATTTGGTTTCAATTGGGTCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTGTATACACTTAATCTAGGTGACAGCAGAGCAGTACTGGCAACAAACAGTAGTGAATTGAATAGGAATGAGAAACTCAATGCTATCCATCTTACAGATAGTCATACTGTTGAAGATGAAGCTGAAAGAGCTCGGCTTCTGATTGATCATCCTGACGATCCTATGACCATTATAGCAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTTGGAGTTGGTTACTTGAAAAAGAAAAGTCTGAATGATACATTGATGGGAATCCTTCGTGTTCGGAGTGATGGTTTATTTGACTTCTTCAGCAATGACGAGGCTATGAAGCTTGTAGAGTCTTATATCCGGAGCAATCCTTTTGGTTTCAGCATGGAGGAGTTGATGAATGTTCCAACGGGAAGGAGGAGAAAGTACCATGACGATGTAACCGTAATTGTGATCATTCTTGGGAAGAATCAGCGGACTTCAAAGGCATCAACTTGCATCTAA 1488 0.4106 MHSIFVNTSSYHMCSTDVVSFDNRLLINGGKSMLGPEGELNISFGYQCNSDRDASSDLISSYKILPKVRRTSSFSCLSGAALSANATLANTSICDGVIGEEILSTWDSPNTFRKVPSLSSLSRLDILSSSLPNSLSNLSCSPSTPSDVLEYDSCPLKSMIAPSRSEGFLNALEVQVAGGAACEDRVQAVCSEQNGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFSKLYLELDTDSISASNNMNLDGSFQHKLDDSVNNSDGQSVSKWGIKSSSAKVDPLCKSFSHGVLDSLQRALSQVENDFLYMVEQEMEDPPDLVSIGSCVLLVLLHGNELYTLNLGDSRAVLATNSSELNRNEKLNAIHLTDSHTVEDEAERARLLIDHPDDPMTIIAGKVKGKLKVTRAFGVGYLKKKSLNDTLMGILRVRSDGLFDFFSNDEAMKLVESYIRSNPFGFSMEELMNVPTGRRRKYHDDVTVIVIILGKNQRTSKASTCI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2704 495 ProSiteProfiles PPM-type phosphatase domain profile. 168 482 IPR001932 -
Dere03g2704 495 SMART PP2C_4 167 480 IPR001932 -
Dere03g2704 495 Pfam Protein phosphatase 2C 304 451 IPR001932 -
Dere03g2704 495 CDD PP2Cc 183 482 IPR001932 -
Dere03g2704 495 SUPERFAMILY PP2C-like 181 483 IPR036457 -
Dere03g2704 495 Gene3D - 159 492 IPR036457 -
Dere03g2704 495 PANTHER PROTEIN PHOSPHATASE 2C 176 480 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2704 Dere-ChrDere03 42329839 42332154 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2704 36 495 PP2C-type Phosphatase Gene Family AT3G16560 54.175 1.50e-160 462