Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2702 ATGCTTGGTCCTGAAGGAGAGCTTAACATAAGTTTTGGCTATCAGTGCAACAGTGATAGAGATGCCTCTTCTGATTTAATCAGCAGCTACAGAATCCTGCCCAAAGTCCGTAGGACAAGCAGCTTCTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCTACGTTAGCCAACACTAGCATCTGCGAAGGTGTGATAGGAGAAGAGATCCTTCCCAGCTGGGACTCTCCTAATACAATTCGTAAGGTACCCTCTTTATCAAGCCTTTCGAGGTTGGATATATTGTCATCTTCTCTCCCAATTAGTTTGTTGAACTTAAGTTGCAGTCCGTCCACTCCAAGTGATGTGCTTGAAAATGAAGGTTTTCTTAATGCTTTAGAAGTACAAGTAGTAGGAGGAGCTGCCGGGGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTGTTTTGTGCAATTTATGATGGCTTTAATGGCAGAGATGCTGCTGACTTTCTGGCGGGTACTCTGTTTGACACCATTTCATCTTATTTTAGTAAGTTATATTTGGAACTGGATACAGATTCCATCAGTGCTTCTAACAATATGGATTTGGATGGATCATTCCAACATAAGTTGGATGATAGTCTTAATAATAGTGATGGACAATCTGTATCGAAATGGGGGATTAAGAGTAGTTCTGCTAAGGTAGACCCATTGTGTAAATCATTTTCTCATGGGCTACTTGATAGCCTCCAGCGTGCTCTTAGTCAGGTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGATCCTCCGGATTTGGTTTCAATTGGGTCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTGTATACACTTAATCAAGGTGACAGCAGAGCAGTATTGGCAACAAACAGTAGTGAATTGAATGGGAATGGGAAACTCAATGCTATCCAGCTTACAGATAGTCATACTGTTGAAGATGAAGCTGAAAGAGCTCGGCTTCTGATTGATCATCCTGACGATCCTATGACCATTATAGCAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTTGGAGTTGGTTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGAATCCTTCGAGTTCGTGATCTTAGAAGCCCTCCATATATTTCTACTGAACCATCATTGAGTGTGCATAACATCTCAGATTCTGATCGTTTTGTCATAGTAGCGAGTGATGGTTTATTTGACTTCTTCAGCAATGACGAGGCTGTGAAGCTTGTAGAGTCTTATATCCGGAGCAGTCCTTTTGGTGATCCTGCAAAGTTTCTCATCGAGCAGCTTGTGTTAAGGGCAGCTGATTCTGCAGGTTTCAGCATAGAAGAGTTGATGAATGCTCCAACGGGAAGGAGGAGAAAGTACCATGATGATGTAACCGTCATTGTCATTATTCTTGGGATGAATCAGCGGACTTCAAAGGCATCAACTTGCATCTAA 1494 0.4183 MLGPEGELNISFGYQCNSDRDASSDLISSYRILPKVRRTSSFSCLSGAALSANATLANTSICEGVIGEEILPSWDSPNTIRKVPSLSSLSRLDILSSSLPISLLNLSCSPSTPSDVLENEGFLNALEVQVVGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFSKLYLELDTDSISASNNMDLDGSFQHKLDDSLNNSDGQSVSKWGIKSSSAKVDPLCKSFSHGLLDSLQRALSQVENDFLYMVEQEMEDPPDLVSIGSCVLLVLLHGNELYTLNQGDSRAVLATNSSELNGNGKLNAIQLTDSHTVEDEAERARLLIDHPDDPMTIIAGKVKGKLKVTRAFGVGYLKKKSLNDALMGILRVRDLRSPPYISTEPSLSVHNISDSDRFVIVASDGLFDFFSNDEAVKLVESYIRSSPFGDPAKFLIEQLVLRAADSAGFSIEELMNAPTGRRRKYHDDVTVIVIILGMNQRTSKASTCI 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2702 497 SMART PP2C_4 113 482 IPR001932 -
Dere03g2702 497 Pfam Protein phosphatase 2C 258 438 IPR001932 -
Dere03g2702 497 CDD PP2Cc 135 484 IPR001932 -
Dere03g2702 497 ProSiteProfiles PPM-type phosphatase domain profile. 122 484 IPR001932 -
Dere03g2702 497 PANTHER PROTEIN PHOSPHATASE 2C 135 482 IPR015655 GO:0004722|GO:0006470
Dere03g2702 497 Gene3D - 112 493 IPR036457 -
Dere03g2702 497 SUPERFAMILY PP2C-like 136 485 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2702 Dere-ChrDere03 42306744 42308960 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2702 4 497 PP2C-type Phosphatase Gene Family AT3G16560 59.188 0.0 558