Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2700 ATGGTTGAGCAGGAAATGGAGGATCCTCCAGATTTGGTTTCAATTGGGTCTTGTGTTTTACTTGTGCTTCTTCATGGGAATGAATTGTATACACTTAATCAAGATAGTCATACTGTTGAAGATGAAGCTGAAAGAGCTCGGCTTCTGATTGATCATCCTGACGATCCTATGACCATTATAGCAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTTGGAGTTGGTTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGAATCCTTCAAGTTCGTGATCTTAGAAGCCCTCCATATATTTCCACTGAACCATCATTGAGTGTGCATAACATCTCAGATTCTGATCGTTTTGTCATAGTAGCGAGTGATGGTTTATTTGACTTCTTCAGCAATGACGAGGCTGTGAAGCTTGTAGAGTCATATATCCGGAGCAATCCTTTTAGTGATCCTGCAAAGTTTCTCATCGAGCAGCTTGTATTAAGGGCAGCTGATTCTGTAGGTCATCTTTGA 519 0.4027 MVEQEMEDPPDLVSIGSCVLLVLLHGNELYTLNQDSHTVEDEAERARLLIDHPDDPMTIIAGKVKGKLKVTRAFGVGYLKKKSLNDALMGILQVRDLRSPPYISTEPSLSVHNISDSDRFVIVASDGLFDFFSNDEAVKLVESYIRSNPFSDPAKFLIEQLVLRAADSVGHL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2700 172 CDD PP2Cc 4 166 IPR001932 -
Dere03g2700 172 Gene3D - 32 170 IPR036457 -
Dere03g2700 172 Pfam Protein phosphatase 2C 23 152 IPR001932 -
Dere03g2700 172 SUPERFAMILY PP2C-like 9 159 IPR036457 -
Dere03g2700 172 ProSiteProfiles PPM-type phosphatase domain profile. 1 172 IPR001932 -
Dere03g2700 172 PANTHER PROTEIN PHOSPHATASE 2C 29 161 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2700 Dere-ChrDere03 42280838 42281668 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2700 1 170 PP2C-type Phosphatase Gene Family AT3G16560 60.417 1.95e-75 232