Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2698 ATGTGTAGCACTGATGTTGTTAGTTTTGACAACAGGCTCCTTATTAACGGGGGGAAAAGCATGCTTGGTCCTGAAGGAGAGCTTAACATAAGTTTTGGCTATCAGTGCAATAGTGATAGAGATGCCTCTTCTGATTTAATCAGCAGCTACAAAATCCTGCCCAAAGTCCGTAGGACAAGCAGCTTCTCTTGTTTGTCTGGTGCAGCCTTAAGTGCCAATGCTACGTTAGCCAACACTAGCATCTGCGATGGTGTGATGGGAGAAGAGATCCTTCCCACCTGGGACTCTCATAATACATTTCGTAAGGTACCGTCTTTATCAAGCCTTTCGAGGTTGGATATATTGTCATCTTCTCTCCCAAATAGTTTGTCAAACTTAAGTTGCAGTCCATCCACTCCAAGTGATGTGCTTGAATATGACTCTTGCCCATTAAAATCCGTGATTGCTCCTTCCAGAAGTGAAGGTTTTCTTAATGCTTTAGAAGTACAAGTAGCAGGAGGAGCTGCCGGGGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTGTTTTGTGCAATTTATGATGGCTTTAATGGCAGAGATGCTGCTGACTTTCTGGCGGGTACTCTGTTTGACACCATTTCATCTTATTTTAGTAAGTTATATTTGGAACTGGATACAGATTCCATCAGTGCTTCTAACAATATGGATTTGGATGGATCATTCCAACATAAGTTGGATGATAGTCTTAATAATAGTGATGGACAATCTGTATCGAAATGGGGGATTAAGAGTAGTTCTGCTAAGGTAGACCCATTGTGTAAATCATTTTCTCATGGGGTACTTGATAGCCTCCAGCGTGCTCTTAGTCAGTTTGAGAATGATTTCTTGTACATGGTTGAGCAGGAAATGGAGGATCGTCCGGATTTGGTTTCAATTGGGTCTTGTGTTTTACTTGTGCTTCTTCATGGGAAGGAATTGTATACACTTAATCAAGGTGACAGCAGAGCAGTATTGGCAACAAACAGTAGTGAATTGAATGGGAATGGGAAACTCAATGCTATCCATTTTACAGATAGTCATACTGTTGAAGATGAAGCTGAAAGAGCTCGGCTTCTGATTGATCATCCTGACGATCCTATGACCATTATAGCAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGTGCTTTTGGAGTTGGTTACTTGAAAAAGAAAAGTCTGAATGATGCATTGATGGGAATCCTTCGAGTTCGTGATCTTAGAAGCCCTCCATATATTTCCACTGAACCATCATTGAGTGTGCATAACATCTCAGATTCTGATCGTTTTGTCATAGTAGCGAGTGATGGTTTATTTGACTTCTTCAGCAATGACGAGGCTGTGAAGCTTGTAGAGTCTTATATCCGGAGCAATCCTTTTGGTGATCCTGCAAAGTTTCTCATCGAGCAGCTTGTATTAAGGGCAGCTGATTCTGCAGATTTCAGCATGGAAGAGTTGATGAATGTTCCAGCAGGAAGGAGGAGAAAGTACCATGACGATGTAACCATAATTGTGATCATTCTTGGGATGAATCCGCGGACTTCAAAGGCATCAACTTGCATCTAA 1596 0.416 MCSTDVVSFDNRLLINGGKSMLGPEGELNISFGYQCNSDRDASSDLISSYKILPKVRRTSSFSCLSGAALSANATLANTSICDGVMGEEILPTWDSHNTFRKVPSLSSLSRLDILSSSLPNSLSNLSCSPSTPSDVLEYDSCPLKSVIAPSRSEGFLNALEVQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLFDTISSYFSKLYLELDTDSISASNNMDLDGSFQHKLDDSLNNSDGQSVSKWGIKSSSAKVDPLCKSFSHGVLDSLQRALSQFENDFLYMVEQEMEDRPDLVSIGSCVLLVLLHGKELYTLNQGDSRAVLATNSSELNGNGKLNAIHFTDSHTVEDEAERARLLIDHPDDPMTIIAGKVKGKLKVTRAFGVGYLKKKSLNDALMGILRVRDLRSPPYISTEPSLSVHNISDSDRFVIVASDGLFDFFSNDEAVKLVESYIRSNPFGDPAKFLIEQLVLRAADSADFSMEELMNVPAGRRRKYHDDVTIIVIILGMNPRTSKASTCI 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2698 531 CDD PP2Cc 169 518 IPR001932 -
Dere03g2698 531 SUPERFAMILY PP2C-like 170 519 IPR036457 -
Dere03g2698 531 ProSiteProfiles PPM-type phosphatase domain profile. 156 518 IPR001932 -
Dere03g2698 531 Gene3D - 145 524 IPR036457 -
Dere03g2698 531 SMART PP2C_4 155 516 IPR001932 -
Dere03g2698 531 Pfam Protein phosphatase 2C 272 473 IPR001932 -
Dere03g2698 531 PANTHER PROTEIN PHOSPHATASE 2C 164 516 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2698 Dere-ChrDere03 42253086 42255404 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2698 24 531 PP2C-type Phosphatase Gene Family AT3G16560 60.777 0.0 559