Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2686 ATGTTTTCTCTAATTTGCACCAAATCAAATTGTGCCCCAGTTAATGATTTTGAGAGGACTGCTGCTTTGCAAAATCCTACAAAGAATGTGCAGGGTGATAAAACAACAATACGTTGCACAAACGGTAGTGATGCAATCTATGGAATGCTTGTGTTGAAAAGCCAAAGTGTGGCATATTTGTTTGGAACCCAAAAGTTGGAGCGGAACATGGAGGTCTCATATAAAAAGAGAAAATATTACATTGTAACTGTTAACTGTAGTCTGGTGGTTGAATTGAAACTGGATGATGGACTTCTTGACAATGAAATAGCATCGAATCCCCAACAGTGGAATATAATTGATGCCAAGGGAATTCTTCTCTGTGGTCCTCCTGGGGTGGGAAAGACATTAATGCTTAAAAAGCTAGCTACTCTTCTAGATGTTAAGAAGCTCACGGTACGTGAAAACAGTGCCCTCCACGTGGTTGTTTTCGATGAAATAGATTCTATTGCAAGGAGCAGATCAGGAAGTGTTACAGCAACCGCTTCAGAAGATAGAGTTGTCAATGAACTCTTAGTTTTGTTGGATGGAATGAAATGA 579 0.3955 MFSLICTKSNCAPVNDFERTAALQNPTKNVQGDKTTIRCTNGSDAIYGMLVLKSQSVAYLFGTQKLERNMEVSYKKRKYYIVTVNCSLVVELKLDDGLLDNEIASNPQQWNIIDAKGILLCGPPGVGKTLMLKKLATLLDVKKLTVRENSALHVVVFDEIDSIARSRSGSVTATASEDRVVNELLVLLDGMK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2686 192 Pfam ATPase family associated with various cellular activities (AAA) 118 144 IPR003959 GO:0005524|GO:0016887
Dere03g2686 192 Pfam ATPase family associated with various cellular activities (AAA) 147 191 IPR003959 GO:0005524|GO:0016887
Dere03g2686 192 CDD RecA-like_protease 116 192 - -
Dere03g2686 192 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 191 IPR027417 -
Dere03g2686 192 PANTHER VESICULAR-FUSION PROTEIN NSF 147 191 IPR039812 GO:0016887|GO:0035494
Dere03g2686 192 Gene3D - 147 192 IPR027417 -
Dere03g2686 192 Gene3D - 51 146 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2686 Dere-ChrDere03 42063751 42070597 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2686 117 191 Calmodulin-binding Proteins AT3G56690 32.653 3.32e-08 50.8