Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2677 ATGGATGGTAATAAGGATGAAGCTTTGAGGTGTATTCGCATCGCTGAGGAGGCAATCGCAACAGGGAACAAAGCGCGTGCACTTAAATTTATCAAAATTGCACAACGGCTGAATCAGAATCTGCCAGTGGATGCGTTACTCACCATGTGTGAGAGGCTTGATTCTGAGTCGCCTGCGTCTTCTAAGGATGAAAACTGTGTCCATCAGGTTAAGAGGGAGCATGATTCAATAAAAAGTGATGGGGTATTGAATGGTGAGAGGAATTATACCGAAGAACATGTTCAATTGATTAGGGAGATTAGGGGGAAGAACGATTATTACGCCATTCTTGGTGTGGAGAAGACTTGTTCTGTTGAGGAGATTAGGCGAGCTTATAGGAAATTGTCATTGAAAGTTCATCCTGACAAGAATAAAGCACCGGGTTCTGAAGAGGCATTTAAGAAGGTGTCCAAGGCGTTCAAGTGTTTAAGTGATGATGGTTCAAGGAGGCAGTATGATCAGACAGGGTTAGTTGAGGAGTTTGAATACAACCAGCAGCACAATGTCAGGCGCAGGCGAAGGACTACTGCACGTGATTTTTTTGACGATGACTTTGATCCTGATGAGATATTTAGGGCATTTTTTGGACAAGGAGACGTATTTGGGAGAACTCATGTTTACAGGACACGGGGAACGGGCAGTCACCAGAGGCAGGAATTTCAAGGAGGAGGGCTTAATATTATGCTCCTTCTGCAACTTGTACCATTCTTGATAATTTTTCTGCTTGCCTACTTGCCATTTTCCGAACCAGACTATTCTTTGCATAAGAATTACTCATATCAGATTCCCAAGACAACGGAAAAGTATGGGGTAGAGTTTTTTGTGAAATCTGAATCATTTGATGCTAAATATCCACATGGAAGTCCTGCTCGTGTAGATATTGAGGGGAATGTGATAAAGGATCATAAAAATTTGCTTCGTCGTTACTGTCAAATAGAGCTCCAGAGGCGTAGTTGGAATAGAAATCTGCCAACTCCTCACTGCGAAAAGCTTCAGAAACTTGGAGTAGCTTGA 1053 0.4264 MDGNKDEALRCIRIAEEAIATGNKARALKFIKIAQRLNQNLPVDALLTMCERLDSESPASSKDENCVHQVKREHDSIKSDGVLNGERNYTEEHVQLIREIRGKNDYYAILGVEKTCSVEEIRRAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDGSRRQYDQTGLVEEFEYNQQHNVRRRRRTTARDFFDDDFDPDEIFRAFFGQGDVFGRTHVYRTRGTGSHQRQEFQGGGLNIMLLLQLVPFLIIFLLAYLPFSEPDYSLHKNYSYQIPKTTEKYGVEFFVKSESFDAKYPHGSPARVDIEGNVIKDHKNLLRRYCQIELQRRSWNRNLPTPHCEKLQKLGVA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2677 350 CDD DnaJ 105 158 IPR001623 -
Dere03g2677 350 Gene3D DnaJ domain 102 220 IPR036869 -
Dere03g2677 350 PRINTS DnaJ domain signature 141 161 IPR001623 -
Dere03g2677 350 PRINTS DnaJ domain signature 107 125 IPR001623 -
Dere03g2677 350 PRINTS DnaJ domain signature 125 140 IPR001623 -
Dere03g2677 350 ProSiteProfiles dnaJ domain profile. 105 169 IPR001623 -
Dere03g2677 350 SUPERFAMILY Chaperone J-domain 102 217 IPR036869 -
Dere03g2677 350 Pfam DnaJ domain 105 166 IPR001623 -
Dere03g2677 350 FunFam Chaperone protein dnaJ 49 101 219 - -
Dere03g2677 350 SMART dnaj_3 104 161 IPR001623 -
Dere03g2677 350 PANTHER AT29763P-RELATED 1 346 - -
Dere03g2677 350 Pfam Domain of unknown function (DUF1977) 261 331 IPR015399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2677 Dere-ChrDere03 41950559 41951611 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2677 106 166 C2H2 Transcription Factor Family AT1G74250 43.284 2.01e-07 50.8