Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2676 ATGGATGGTAACAAGGATGAAGCTTTGAGGTGTATTCGCATCGCTGAGGAGGCAATTGCAACAGGGGACAAAGCGCGTGCTCTTAAATTTATCAAAATTGCACAGCGGCTAAATCAGAATCTGCCAATGGATGTGTTACTCACCATGTGTGAGAGGCTTGATTCTGAGTCGCCTGCTCCTTCTAAGGATGAAAACTGTGTCCATCAGGTTAAGAGGGAGCATGATTCAATGCAATGTGATGGGGAATTGAATGGTACGAGGAATTATACCGAAGAACATGTTCAATTAATTAGGGAGATTAAGGGAAAGAACGATTATTACGCCATTCTTGGTGTGGAGAAGACTTGTTCTGTTGAGGAGATTAGGCGAGCTTATAGGAAATTGTCATTGAAAGTTCATCCTGATAAGAATAAGGCACCGGGTTCTGAAGAGGCATTTAAGAAGGTATCCAAGGCTTTCAAGTGTTTAAGTGATGATGGTTCAAGGAGGCAGTATGATCAGACAGGGCTAGTTGAGGAGTTTGAATACAACCAGCAGCACAATGTCAGGCGCAGGCGAAGGACTGCTGCACAGGATTTTTTTGACGATGACTTTGATCCCGATGAGATATTTAGGGCATTTTTTGGACAAGGAGACGTATTTGGGAGAACTCATGTTTACAGGACACGGGGAACGGGCAGTCACCAGAGGCAGGAATTTCAAGGAGGAGGGCTTAATATTATGCTCCTTCTGCAACTTGTACCATTCTTGATAATTTTTCTGCTTGCCTACTTGCCATTTTCCGAACCAGACTATTCTTTGCATAAGAATTACTCATATCAGATTCTCAAGACCACGGAAAAGTATGGGGTAGAGTTTTTTGTGAAATCTGAATCATTTGATACTAACTATCCACATGGAAGTCCTGCTCGTGCAGATATTGAGGGGAATGTGATAGAGGATCATAAAAATTTGCTTCGTCATTACTGCCAAATAGAGCTCCAGAGGCGTAGTTGGAATAGGAATCTGCCAACTCCTCACTGTGAAAAGCTTCATAAGCTTGGAGTAGCTTGA 1053 0.4274 MDGNKDEALRCIRIAEEAIATGDKARALKFIKIAQRLNQNLPMDVLLTMCERLDSESPAPSKDENCVHQVKREHDSMQCDGELNGTRNYTEEHVQLIREIKGKNDYYAILGVEKTCSVEEIRRAYRKLSLKVHPDKNKAPGSEEAFKKVSKAFKCLSDDGSRRQYDQTGLVEEFEYNQQHNVRRRRRTAAQDFFDDDFDPDEIFRAFFGQGDVFGRTHVYRTRGTGSHQRQEFQGGGLNIMLLLQLVPFLIIFLLAYLPFSEPDYSLHKNYSYQILKTTEKYGVEFFVKSESFDTNYPHGSPARADIEGNVIEDHKNLLRHYCQIELQRRSWNRNLPTPHCEKLHKLGVA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2676 350 SUPERFAMILY Chaperone J-domain 102 217 IPR036869 -
Dere03g2676 350 CDD DnaJ 105 158 IPR001623 -
Dere03g2676 350 Pfam DnaJ domain 105 166 IPR001623 -
Dere03g2676 350 Pfam Domain of unknown function (DUF1977) 261 331 IPR015399 -
Dere03g2676 350 PRINTS DnaJ domain signature 141 161 IPR001623 -
Dere03g2676 350 PRINTS DnaJ domain signature 107 125 IPR001623 -
Dere03g2676 350 PRINTS DnaJ domain signature 125 140 IPR001623 -
Dere03g2676 350 ProSiteProfiles dnaJ domain profile. 105 169 IPR001623 -
Dere03g2676 350 FunFam Chaperone protein dnaJ 49 101 219 - -
Dere03g2676 350 SMART dnaj_3 104 161 IPR001623 -
Dere03g2676 350 Gene3D DnaJ domain 102 220 IPR036869 -
Dere03g2676 350 PANTHER AT29763P-RELATED 1 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2676 Dere-ChrDere03 41942464 41943516 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2676 100 166 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.211 1.61e-07 50.8