Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2661 ATGGCTAACAACGACCATGAGAGGAAGAAAAAGGCCGCCATTATCACCGTGTCTGGCATCCTTCTGGTGGCCATGGTAGCGGCGGTGGCCGTGGGTTTGTCCGGCGCAGCCAAGGATGAGGCAAAGGAAGAGGTTGCGAATGAGGGTCACGGTGAAAAACAGATTGCAGCGACTCAAAAGAACGTGGAAATGGTTTGCAGTTCAGCTCAATACAAAGAAACCTGCAAGAGAAGCCTCTCCAAAACATCCAACCAAACCACCGACGTAAAAGAACTCATCAAAGCCGCCTTCCACGCCTCCGCCAAGGAGTTCCATAAGTTCATCAACAACTCCACCCTCTACGACGAGTTGGTCAAGGACAACATGACCAAACAGGCCATGCAAATCTGCCACGAGGTGTTGGATTACGCCATTGACGATATTAGGAGCTCGATGGATAGCGTGGATAAGTTCGAAATGAGCAAGCTGGGTGAATATGCCTACGACATTAAGGTGTGGCTCGGAGCCACCATCTCCCACCAACGCACCTGCTTAGATGCCTTCGAGAACACAACCACTCACGCTGCCGAGACCATGACCAAGGTTTTGAACACCTCCCTGGAGCTCAGTATGAATGCTTTGGACATCATCTCCGGCATGTCCGATCTGGCCCAATCCTTTGAATTCGTCAACATCAGCGACAAACTTAATGGTAATAACACTCATCGGAAGCTCCTGCCGGAGAGTTTGCCATCGTGGATAAGTCAAGGCCAACGCCACCGTCTCCTTCAGGCAGCCGTCAATGGTCCTGCAGGAATTAAGGTCGACGTGGTTGTGGCTCAAGATGGAACAGGGCAGTTCAAAACACTCACCGAGGCTCTTAACACTGTTCCGAAGAAGAATGTGAGGCCCTATGTGATTTACGTGAAGGCTGGCTTATACAATGAGATTGTGAACGTGCAGAAGTCAATGAGTTATGTCACTATCATCGGAGATGGTCCCACACTTACCAGATTCACCGGAAACCTCAACTTTGTGGATGGTGTCCAAACTTACAAAACTGCAACATTCGGCGTGAATGCTCCTTACTTCACGGCCATGCACGTGGGGTTTGAGAACTCCGCAGGAGCAGATAAGCACCAGGCGGTGGCTCTCCGGTATAACAACAAAGGTCCCGGTGCTGATGCTTCCCACAGAGTGAAATGGCCTGGCGTCTCTGTCATTAGCCCATTAGAAGCTGAACATTTCTATCCCAACAAGTTCTACGAGCTCCACAATACAACTACAAATGAGAACGACGAGTGGATCTTGGCCTCTGGGATACCCTACTCCCTTGGGCCCATGGCCATGCCAAATTAA 1338 0.5037 MANNDHERKKKAAIITVSGILLVAMVAAVAVGLSGAAKDEAKEEVANEGHGEKQIAATQKNVEMVCSSAQYKETCKRSLSKTSNQTTDVKELIKAAFHASAKEFHKFINNSTLYDELVKDNMTKQAMQICHEVLDYAIDDIRSSMDSVDKFEMSKLGEYAYDIKVWLGATISHQRTCLDAFENTTTHAAETMTKVLNTSLELSMNALDIISGMSDLAQSFEFVNISDKLNGNNTHRKLLPESLPSWISQGQRHRLLQAAVNGPAGIKVDVVVAQDGTGQFKTLTEALNTVPKKNVRPYVIYVKAGLYNEIVNVQKSMSYVTIIGDGPTLTRFTGNLNFVDGVQTYKTATFGVNAPYFTAMHVGFENSAGADKHQAVALRYNNKGPGADASHRVKWPGVSVISPLEAEHFYPNKFYELHNTTTNENDEWILASGIPYSLGPMAMPN 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2661 445 Gene3D - 264 380 IPR012334 -
Dere03g2661 445 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 214 IPR035513 -
Dere03g2661 445 PANTHER PECTINESTERASE 380 429 - -
Dere03g2661 445 FunFam Pectinesterase 58 214 - -
Dere03g2661 445 Pfam Pectinesterase 269 380 IPR000070 GO:0030599|GO:0042545
Dere03g2661 445 SUPERFAMILY Pectin lyase-like 266 381 IPR011050 -
Dere03g2661 445 NCBIfam pectinesterase inhibitor domain 56 212 IPR006501 GO:0004857
Dere03g2661 445 CDD PMEI-like_3 65 214 - -
Dere03g2661 445 Pfam Plant invertase/pectin methylesterase inhibitor 62 209 IPR006501 GO:0004857
Dere03g2661 445 SMART PMEI_2 57 209 IPR006501 GO:0004857
Dere03g2661 445 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 60 213 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2661 Dere-ChrDere03 41720657 41722944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2661 3 379 Carbohydrate Esterase AT3G05610 42.706 2.27e-98 307