Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2643 ATGGTGTCGCTGAAGCTTCAGAAGCGGCTTGCCGCCAGCGTCCTCAAGTGCGGGAGAGGGAAGGTCTGGCTTGACCCCAATGAGGTTAACGAGATTTCCATGGCCAATTCCAGACAAAACATCAGAAAACTGGAGGCCAAGAGAAAGGGTCGTCACTCTGAATATGGTAAGTGTGAGGGTACTAGGGAGGCACGGCTGCCAACAAAAGTACTGTGGATGAGGAGAATGCGTGTATTGAGGCGACTGCTTCGTAAATATCGTGAATCCAAAAAGATTGACAAGCACATGTACCATGACATGTACATGAACGTAAAAGGTAATGTCTTCAAGAACAAGCGTGTTCTAATGGAGAGTATCCACAAGTCCAAGGCTGAAAAGGCCAGAGAGAAAACACTGTCGGACCAATTTGAGGCCAAGCGAGCTAAGAGCAAGGCAAGCAGGGAGAGAAAGTTGGCTAGGAAGGAGGAGCAGTTGGCACAAGGACCTGGAGAGAGAGCACCTCCTGCTGCATCTCAACCGCAGGCTGAGGGGACTAAGAAAACAAAGAAGTGA 552 0.4946 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLEAKRKGRHSEYGKCEGTREARLPTKVLWMRRMRVLRRLLRKYRESKKIDKHMYHDMYMNVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKLARKEEQLAQGPGERAPPAASQPQAEGTKKTKK 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2643 183 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Dere03g2643 183 MobiDBLite consensus disorder prediction 121 160 - -
Dere03g2643 183 Pfam Ribosomal protein L19e 4 44 IPR000196 GO:0003735|GO:0005840|GO:0006412
Dere03g2643 183 Pfam Ribosomal protein L19e 45 122 IPR000196 GO:0003735|GO:0005840|GO:0006412
Dere03g2643 183 MobiDBLite consensus disorder prediction 121 183 - -
Dere03g2643 183 SMART Ribosomal_L19e_2 3 123 IPR000196 GO:0003735|GO:0005840|GO:0006412
Dere03g2643 183 Gene3D - 35 165 - -
Dere03g2643 183 SUPERFAMILY Ribosomal protein L19 (L19e) 3 121 IPR035970 GO:0003735|GO:0005840|GO:0006412
Dere03g2643 183 FunFam Ribosomal protein L19 35 166 - -
Dere03g2643 183 PANTHER 60S RIBOSOMAL PROTEIN L19 1 44 IPR039547 GO:0003723|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2643 Dere-ChrDere03 41452766 41454898 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2643 1 183 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 72.596 3.52e-101 288