Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2642 ATGTCCCGGGGCGGCTCACGTTACGTTCAACTGCCGCTGGAGCCGCCGGAGACGATGATGTCGCCCGTCGCATCTTTCCGGCAAGGGAGTCCTGAGCCTGCTCGGATTTTCGATGAGTTGCCTAATGCTACCATCGTCTCCGTCTCTCGTCCCGATGCTGGCGACATCAGTCCCATGCTTCTCTCTTACAACATTGAGTTCCAATATAAACAATTCAAGTGGCAGTTAGTGAAGAAAGCTTCTCAAGTGATTTATTTGCATTTTGCATTGAAGAAACGTGCATTTATTGAGGAAATTAATGAAAAGCAAGAGCAGGTTAAAGAATGGCTTCAAAATCTAGGAATAGGAGAAAACTCGACTATGGTTCAAGATGATGAAGAAGCAGATGATGAAACTATCTTGCATCACGATGAAAGTGCTAAAGACAGAGACGTTCCATCTATTGCTGCATTACCAATTATACGCCCTGCCTTAGGAAGACAGCAATCTATATCAGACAGAGCGATGATTGCTATGCAAGGATATCTCAATCATTTTTTTGGAAATATTAGTATTGTAAACTCTCCAGAGGTTTGCAAGTTCTTGGAGGTCTCAAAGTTATCTTTCTTACCTGAATATGGCTCTAAGTTGAAGGAAGAATATGTAATGGTGAAGCATCTGCCAAACATTTTGAAGGATGATGATTCTAGAAAATGTTGTATATTTCACTGTTTCAGTTGTTGCAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAGCCTGGATTCTTGGCATTTCTGGCAGATCCTTTTGATGCACAACCTTTAGACATTATTGTTTTTGATATACTTTGTGCCTCAGATGGGAATAGAGAAGATTGCCTATCACTAGCGAAGGAAATGAAGGAACCAAACCCTTTACGTCATTCGTTCAAGGTGACTTCTGGAAATCAAAGCATTAGGGTAAGAGCAAAAAGTAGTGATAAAGTTAAAGATTGGGTTTCTGCTATAAACGATGCTGGACTGCAACCTCCTGAAGGCTGGTGTCATCCTCACTGCTATGGTTCTTTTGCTCCTCCAAGAGGCTTGATTGAAGATGGTAGTCAGGCTCAATGGTTCATAGATGGTCAAGCAGCATTTGAGGCCATTTCTTCTTCAATTGAGGATGCAAAATCAGAGATATTTATGTGTGGGTGGTGGCTGTGCCCAGAACTGTATCTGCGGCGTCCTTTTGACTCTCATGCTTCATCAAGGCTTGATAATCTGCTAGAAGCAAAGGCTAAGCAAGGGGTTCAGATTTTTATTCTTCTCTACAAAGAGGTGGCTCTTGCTTTGAAAATCAACAGTATTTATAGCAAGAAAAAGCTTCTTAGCATTCATGAGAATGTAAGGGTATTACGTTATCCTGATCATTTTTCTAGTGGCGTTTACCTGTGGTCTCACCATGAAAAACTAGTTATTGTTGATCACAGGATTTGCTTTATTGGAGGACTGGATTTGTGCTTTGGTCGTTATGACACACCTGAGCACAAAGTGGGAGACTTCCCTCCTTTGATCTGGCCAGGGAAAGATTATTATAACCCTAGGGAGTCTGAGCCAAACTCATGGGAAGATACTATGAAAGATGAATTGGATCGTGTAAAATATCCTCGTATGCCTTGGCATGATGTCCATTGTGCCCTTTGGGGACCACCTTGTCGTGACATTGCTAGGCATTTTGTTCAGCGATGGAATTATGCAAAGAGGAACAAAGCTCCATATGAGCAAGCAATACCATTACTAATGCCTCAACATCATATGGTTATTCCACACTACTTGGGAAGAGACAAAGAATTGGAGATTGAAAGTGAGAAATCCGACAATCCTGGAAGCATCACAAGGGACAATTCATTTTCTTTATCATCCCAAAATATTCCTCTGCTTTTGCCTCAGGAATCTGGTGGGTTGCATACTACTGAAGGATACCCGAAATCAAATGGGTTAAGCACCTTTTCAAATCTTGATCAGCCAAGCAGGATGATCACTGGTCTTCCTTTCTTTTTCCGAAAGGCCAAAATTGAACCAGTTGGCCCTGATACACCAATGAAAGCCTTCTTGGATGAGCTTGATTTTGTGGATGATATTGGAAAAATGTCTCAGGATAGAGTTTCTCGTATCAGCACAGAAGGTACAGATCCAGAATGGTGGGAAGCACAAGAGCGGGGTGATCAGGGAGGCTTTGCAGATGAATCTGGGCAAGTTGGTCCTCGTGCTTCCTGCCGCTGTCAGGTTATTAGGAGTGTTAGTCAATGGTCTGCTGGGACAAGCCAAACCGAACAGAGCATCCACCTTGCTTATTGCGCTCTTATAGAGAAAGCAGAGTACTTCATCTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGGAGATGAGATGATAAAAAATCGTGTGTTAGAAGCTTTATATCAAAGGATTATGCGAGCTTACAATGATAAAAAAATATTTAGGGTTATAATTGTCATACCACTCCTTCCTGGCTTCCAGGGGGGCCTTGATGATAGTGGTGCAGCATCTGTAAGAGCCATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAAAAATCTATATTACATAATCTGTATGATCTCCTTGGTGCAAAATTACAAGATTACATATCTTTCTATGGCCTCAGGGCTTATGGACAACTCTTTGATGACGGTCCTGTGGCAACCAGCCAGGTGTATGTTCATAGTAAAATCATGATTGTCGACGACTGTACAACTTTGATTGGATCTGCTAATATTAACGATAGAAGTTTACTTGGCTCCAGAGACTCTGAGATTGGTGTTGTTATAGAAGACAGAGAGTCAACCGGTTCATATATGGGTGGAAAACCCTGGAAAGCAGGAAAGTTCTCACTGACACTTCGATTGTCATTATGGTCTGAACACTTGGGTCTCCAAGCAGGAGAGATTGATCAAATAGTGGACCCGGTTGCTGAGTCTACTTATAAGGACATTTGGATGGCAAGAGCAAAGACAAATACTGCAATCTACCAAGACGTCTTTTCTTGCGTACCAAATGATCTAATACACTCCAGATTAGCTTTCAGACAGAGCACAGCTTTCTGGAAAGAAAAAATTGGTGACACTACCATTGATTTAGGAATTGCCCCAAAAATGTTGGAATCTTATCGTAATGGAGCTATCAAGAATACTGATCCCTTGGAGAGATTAGCTTCAGTGAAAGGTCATCTTGTCTCTTTTTCCTTGGAGTTCATGTGTAAAGAAAATCTGAAACCTGCCTTCAATGAAAGCGAGTACTACGCTTCTCAACACTTGTACAAGCCTTATCCTTACGGACTTCTTATTGTGGTAGTGGTGGCCATGGTTCTTTTTCCATCTCTTGTCAATGGACTGGCAAGAACTGTGTCATTCAAGAGAGAAAAGAATAATCAAAAGGATGAAGATGGAAAGAAAGTTGTGGAAGCATTGGCAAAGGAAGCAAAAAAGAATGAACTGTTGTTGAGTTCATCAGGAATTGTTAAGTCTCATAAGGCCAACACTTTAGCTTCTGTCTTCTCCAAGAGGGGCAGAAAAGGGATCAATCAGGATTCCCTTACAGTTTGGAAGGAATTTGCTTGCCAAGATGACATGATCTTCTGTGGAATATTTGATGGACATGGCCCTTGGGGACACTTTGTAGCCAAAAGGGTCAGAGAATTAATACCTGCTTCTTTGCTCTGCAATTGGCAAGAGACTTTGGCTGCAACATCACTTGACCTGGATTTTAAATTGGAAGCAGACAGAAACCTTCATTGGTTTGACTTATGGAAGAAATCTTACTTGAAGACTTGTGCTGCTGTGGATCAGGATCTGAAGAAGCATACTGGTTTTGATTCCTTTGGAAGTGGTGCTACAGCTTTGACAATCATCAAACAGGGGGATCGTCTCATCATAGCAAATTTAGGCGATTCTAGGGCCGTCTTGGCAACCACTTCAGAGGATGATGATGGCACATTGATTCCTCTTCAACTGACCACTGACTTAAAGCCAAATTTACCAGAGGAGGCAGAGCGCATAACGCAGTGTAGAGGGAAGGTGTTTTGTTTGGAAGATGAACCAGGAGTGTACAGAGTGTGGTTGCCGAATGGTAAAACTCCAGGGCTAGCCATATCAAGGGCTTTTGGAGATTACTGTGTCAAGGACTTTGGACTCATCTCTGTGCCTGAAGTCACACAAAGAACACTCACCACCAAGGATCAATTCCTCATCATGGCAACAGATGGAGTATGGGATGTTATCTCCAACCAAGAAGCAGTGAAGATTGTGTCCTCAGCACCACAGAAGGAAAAAGCAGCTCAGAGGCTGGTTAAATGCGCCGTCCATGAATGGAGACGCAAGAGAAGAAGCATTGCCATGGACGACATGTCTGCTATTTGCCTCTTCTTTCACTCTTCTTCCCCATCTCATCCACTCCTAACTTCTAAGCATCTCATATAA 4467 0.4227 MSRGGSRYVQLPLEPPETMMSPVASFRQGSPEPARIFDELPNATIVSVSRPDAGDISPMLLSYNIEFQYKQFKWQLVKKASQVIYLHFALKKRAFIEEINEKQEQVKEWLQNLGIGENSTMVQDDEEADDETILHHDESAKDRDVPSIAALPIIRPALGRQQSISDRAMIAMQGYLNHFFGNISIVNSPEVCKFLEVSKLSFLPEYGSKLKEEYVMVKHLPNILKDDDSRKCCIFHCFSCCNDNWQKVWAVLKPGFLAFLADPFDAQPLDIIVFDILCASDGNREDCLSLAKEMKEPNPLRHSFKVTSGNQSIRVRAKSSDKVKDWVSAINDAGLQPPEGWCHPHCYGSFAPPRGLIEDGSQAQWFIDGQAAFEAISSSIEDAKSEIFMCGWWLCPELYLRRPFDSHASSRLDNLLEAKAKQGVQIFILLYKEVALALKINSIYSKKKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHRICFIGGLDLCFGRYDTPEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDRVKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPYEQAIPLLMPQHHMVIPHYLGRDKELEIESEKSDNPGSITRDNSFSLSSQNIPLLLPQESGGLHTTEGYPKSNGLSTFSNLDQPSRMITGLPFFFRKAKIEPVGPDTPMKAFLDELDFVDDIGKMSQDRVSRISTEGTDPEWWEAQERGDQGGFADESGQVGPRASCRCQVIRSVSQWSAGTSQTEQSIHLAYCALIEKAEYFIYIENQFFISGLSGDEMIKNRVLEALYQRIMRAYNDKKIFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQKSILHNLYDLLGAKLQDYISFYGLRAYGQLFDDGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVVIEDRESTGSYMGGKPWKAGKFSLTLRLSLWSEHLGLQAGEIDQIVDPVAESTYKDIWMARAKTNTAIYQDVFSCVPNDLIHSRLAFRQSTAFWKEKIGDTTIDLGIAPKMLESYRNGAIKNTDPLERLASVKGHLVSFSLEFMCKENLKPAFNESEYYASQHLYKPYPYGLLIVVVVAMVLFPSLVNGLARTVSFKREKNNQKDEDGKKVVEALAKEAKKNELLLSSSGIVKSHKANTLASVFSKRGRKGINQDSLTVWKEFACQDDMIFCGIFDGHGPWGHFVAKRVRELIPASLLCNWQETLAATSLDLDFKLEADRNLHWFDLWKKSYLKTCAAVDQDLKKHTGFDSFGSGATALTIIKQGDRLIIANLGDSRAVLATTSEDDDGTLIPLQLTTDLKPNLPEEAERITQCRGKVFCLEDEPGVYRVWLPNGKTPGLAISRAFGDYCVKDFGLISVPEVTQRTLTTKDQFLIMATDGVWDVISNQEAVKIVSSAPQKEKAAQRLVKCAVHEWRRKRRSIAMDDMSAICLFFHSSSPSHPLLTSKHLI 1488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2642 1488 ProSiteProfiles PH domain profile. 244 335 IPR001849 -
Dere03g2642 1488 Gene3D - 225 334 IPR011993 -
Dere03g2642 1488 Gene3D - 1165 1475 IPR036457 -
Dere03g2642 1488 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 470 497 IPR001736 GO:0003824
Dere03g2642 1488 Pfam Phospholipase D Active site motif 470 497 IPR001736 GO:0003824
Dere03g2642 1488 SMART PH_update 209 337 IPR001849 -
Dere03g2642 1488 SUPERFAMILY Phospholipase D/nuclease 741 945 - -
Dere03g2642 1488 SMART PP2C_4 1169 1470 IPR001932 -
Dere03g2642 1488 CDD PLDc_vPLD1_2_yPLD_like_2 760 944 - -
Dere03g2642 1488 CDD PH_PLD 186 333 - -
Dere03g2642 1488 SMART pld_4 900 927 IPR001736 GO:0003824
Dere03g2642 1488 SMART pld_4 470 497 IPR001736 GO:0003824
Dere03g2642 1488 SUPERFAMILY PH domain-like 239 333 - -
Dere03g2642 1488 FunFam Probable protein phosphatase 2C 34 1169 1474 - -
Dere03g2642 1488 FunFam Phospholipase 734 954 - -
Dere03g2642 1488 Coils Coil 92 112 - -
Dere03g2642 1488 ProSiteProfiles PPM-type phosphatase domain profile. 1178 1472 IPR001932 -
Dere03g2642 1488 Pfam PLD-like domain 773 946 IPR025202 -
Dere03g2642 1488 CDD PLDc_vPLD1_2_yPLD_like_1 363 507 - -
Dere03g2642 1488 CDD PP2Cc 1179 1472 IPR001932 -
Dere03g2642 1488 Pfam Protein phosphatase 2C 1202 1450 IPR001932 -
Dere03g2642 1488 Gene3D Endonuclease Chain A 720 957 - -
Dere03g2642 1488 Gene3D Endonuclease Chain A 356 593 - -
Dere03g2642 1488 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 900 927 IPR001736 GO:0003824
Dere03g2642 1488 SUPERFAMILY Phospholipase D/nuclease 320 590 - -
Dere03g2642 1488 PANTHER PHOSPHOLIPASE D 165 1093 IPR015679 -
Dere03g2642 1488 SUPERFAMILY PP2C-like 1172 1473 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2642 Dere-ChrDere03 41421096 41442824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2642 4 980 Phospholipase D Gene Family (Wang group) AT3G16785 72.200 0.0 1383