Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2608 ATGTCAAAGGGAACAAGTCTGGTGCTGGATTCATCTGAAAATGGCACAGATTTATCTCAGGATGACATTGGCACCATCGAGGAAACCCCAGAAGAGTCAATTTTGTCACGACAAACTTCTGTGAATCTTGTTCCTTTTATTGGTCAAAGATTTGTTTCTCAAGAAGCCGCTTATGAATTTTATTGCAGTTTTGCAAAACAATGTGGCTTTTCTATTAGACGACATCGCACTCGGGGAAAGGATGGGGTTGGTCGGGGAGTTACGAGAAGGGATTTTACTTGCCATCGTGGTGGGTACCCCCAGATTAAGCCATCTGATGATGGAAAGATGCAAAGGAATCGCAAATCTTCTCGTTGTGGTTGTCAAGCATACATGCGAATTGTCAAGAGGGCAGATTTTGATGTCCCTGAATGGCGTGTTACTGGCTTTAGCAACATCCACAACCATGAGTTGTTAAAATCCAATGAGGTGCGTCTTCTTCCAGCATATTGTACAATATCTCCAGATGACAAGAGCCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTAAGGCAAATGTTAAGATTGATGGAGCTAGAGAAAGGCATCAAACTTGGTTGTTTACCTTTTACAGAGATTGACGTGAGAAACTTGCTGCAGTCTTTTAGAAATGTTGATAGAGATAATGATGCTATTGATCTTATTGCTATGTGCAAGAGATTAAAAGATGAAAATCACAACTTCAAGTACGAATTTAAGATAGATAGTAATAACAGGCTAGAGCATATTGCCTGGTCCTATGCCTCTTCTATCCAACTGTATGAAGTATTTGGAGATGCAGTGGTTTTTGATACAACCCATCGTCTGGATGCCTATGACATGTTGTTAGGAATTTGGCTTGGAGTGGACAATCATGGAATGACTTGTTTCTTTGGTTGTGCACTTCTGCGAGATGAAAATATGCAGTCTTTTTCATGGGCTCTAAAGGCATTCTTAAGCTTCATGGAGGGAAAGGCCCCACAGACAATATTAACTGATCATAATATGTGGCTGAAAGAAGCTATTGCTGTTGAAATGCCTGAAACCAGACATGCCTTTTGCATATGGCACATTATTGCTAAGTTCTCTGACTGGTTTTCTGTACTACTTGGATCACATTATGATGAGTGGAAAGCTGAGTTTCATCGGCTCTACAATTTGGAACTTGTGGAAGATTTTGATGAAGGATGGAGGCAAATGGTTGATAAATATGGACTCCATGCAAACAAGCACATTGTTAGCTTATATTCATTAAGGACATTTTGGGCTTTACCATTCTTGAGGTGCTACTTCTTTGCAGGATTGACCAGCACATGTCAATCTGAGTCCATTAATGCTTTCATCCAACGGTTCTTGAGTGCCCAGTCTCAACTAGATCACTTTGTAGAGCATGTGGCTGATATTGTTGAATTTAATGACCGGGCTGGTTCAAAGCAGAAGATGCAACGAAAACTGCAAAAAGTGTGCCTTAAAACTGGTTCACCTATTGAATCCCATGCTGCCACCATGCTTACTCCTTATGCCTTTAGTAAACTCCAGGATGAGCTAGTTTTGGCACCACAATATGCCTCCTTTTTGGTTGATGAAGGTTGCTTCCAGGTCAGACACCACACTCAGATGGATGGAGGGTGCAAAGTATTTTGGGTTCCTTGTCAAGAACACATCAGCTGCAGCTGCCATCTGTTTGAGTTTTCAGGCATCTTATGTAGACATGTTCTGCGTGTCATGTCAACTAATAACTGTTTTCACATCCCTGAACAATATTTACTACCCCGTTGGCGTGGTACCTGTTCATCTTCCACTAACCCCTTCCGTGGTACAACTTCCAGGGATCATCCTGAAAGAATACAATTTTTGGAATCCATGGTTTCAACCCTTGTAATGGAATCCATTGAAACCGAGGAACGCCTTGATGCTGCTTGTGAGCAAATTTCCGTGGTTTTATCACGTATTAAAACCCTTCCCAGGTCAAGTCATGGGGTGAATGACATTGCATATAATTATCAATCAGATTCATTGATTCTGCCAGAGGTGGAGGATGCTGATGGTATAATTCATGGTTTTACAATTGCAAATCCCCATGATTCTATCACTTTAGGAAAACTAAAGGAGAGGAGGGCAAGAGAGGGAGTCGATATAACTCGGAAGCGAAGACATTTTTCGGGGCCATTGTGTGGGCAGTATGGACATGATGCTTCTGATTGCTCGACAATGGCTGGTGATAATTTGAATGGAGATGCACTAGGGTACTCGTAG 2277 0.4168 MSKGTSLVLDSSENGTDLSQDDIGTIEETPEESILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKMQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFSNIHNHELLKSNEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHNFKYEFKIDSNNRLEHIAWSYASSIQLYEVFGDAVVFDTTHRLDAYDMLLGIWLGVDNHGMTCFFGCALLRDENMQSFSWALKAFLSFMEGKAPQTILTDHNMWLKEAIAVEMPETRHAFCIWHIIAKFSDWFSVLLGSHYDEWKAEFHRLYNLELVEDFDEGWRQMVDKYGLHANKHIVSLYSLRTFWALPFLRCYFFAGLTSTCQSESINAFIQRFLSAQSQLDHFVEHVADIVEFNDRAGSKQKMQRKLQKVCLKTGSPIESHAATMLTPYAFSKLQDELVLAPQYASFLVDEGCFQVRHHTQMDGGCKVFWVPCQEHISCSCHLFEFSGILCRHVLRVMSTNNCFHIPEQYLLPRWRGTCSSSTNPFRGTTSRDHPERIQFLESMVSTLVMESIETEERLDAACEQISVVLSRIKTLPRSSHGVNDIAYNYQSDSLILPEVEDADGIIHGFTIANPHDSITLGKLKERRAREGVDITRKRRHFSGPLCGQYGHDASDCSTMAGDNLNGDALGYS 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2608 758 SMART 26again6 562 589 IPR006564 GO:0008270
Dere03g2608 758 Pfam FAR1 DNA-binding domain 59 152 IPR004330 -
Dere03g2608 758 MobiDBLite consensus disorder prediction 1 34 - -
Dere03g2608 758 Pfam MULE transposase domain 275 367 IPR018289 -
Dere03g2608 758 MobiDBLite consensus disorder prediction 1 23 - -
Dere03g2608 758 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 655 IPR031052 GO:0006355
Dere03g2608 758 ProSiteProfiles Zinc finger SWIM-type profile. 554 587 IPR007527 GO:0008270
Dere03g2608 758 Pfam SWIM zinc finger 559 584 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2608 Dere-ChrDere03 40607808 40610536 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere03g2608 MULE 1.3e-21 CL0219