Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2606 ATGGGAGTTGAGAAAGAAGGAACAAAAGGCGGAGGAAAATATGTTGGTGGTTTCTTCCAGTTGTTTGACTGGACCTCAAAATCTCGGAAGAAACTATTTGCTACCAAGTCAGGTGGACCAGAATCCTTGAATCAGGGAAGAAAAGTTGATGGCAACATGGCAATGACACAGCCCTATATGGTGGATGAAGATGAAATTAGAGCAGGCACAAGTTTTAGGGGAAGTGATCATAGTTATGCTTCATCGGTAACAGATGATGAAGCATGTGGTGCAAGGGTCCCAGGCGTAGTCGCCAGGCTTATGGGATTAGATTCCTTACCCACTTCTGGTTTTCCTGAGCCCGATTCTTCTCCGTTTTTTGATACCCAATCTCTTCAAGACACTGAATATTGCAGGAAAAACCTCAATTATCATCTTGATCAGTCCATTTATTCTGGAAATTTGCTCGAAAAAGTTGGGGGCTCTTCTAGGAATTTCACGGAGTCAAAGCCCCAAAAGACCTTTAGCAGGCCAATTGAAAAGTTCCAAACAGAAGTATTGCCTCCAAAGTCAGCTAAATCGATTCCTGTCACACACCATAGGCATTTGTCCCCTATCAAGAATCCTGGCTTTGTTCCAACCAATAATGCTGCTTATATAATGGAAGCTGCAGCAAGAATAATTGAACCTGGACCCCAAGCTACTGCAAAGCCTAAAACTCCTTTAATAGCACCATCTTCTGTATCGTTGAAGGCTAGAGGTCTCAAAGAAAAAGTAGAGGCTTCACAAAAAGGACTTATCTCTGGTTCATCCTCATTGACCTCTAGAGCTAGAGATTTGAAAGAAAAAAGAGAGGTTTCTCAAAGAACAACTAGGCTTTCTGAACCTTATAAAAAATCGGTTGAGTCAAATGCAGCTAAGTATCTCAAGGGACAGTCTTTAAACAAAAGCTGGAATGGATCTGTGGATACATCCATCCGATCTACTGATTCAGAAGAAGATTTGACTTCAAAGAATAGTGGAAAGTCTATCTCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGGAGGGAAGGTTTGAGTTTGAATGGCAGTAGAGATTTGGTGGGCCAGAAAGAACATCATGAGGTTAAATCTAACTCACTACTCAAGAACAATGTTCAAAAGAATTTACATAAAAAATCTTCTGTCCAGAATACTTCTGGTGTTCTCCGGCAAAATAATCAGAAACAGAATTGTTCCATCGATAAGGGAAAATTACCATCAAAGCCATTGGTTTCCAATTCCCATGGTAGGAAAGATCTGTCAGGGGATTCCTCTTATGGACGTCATAGAAGTTCTAGTTGTAGATCTACTGGGAAATCCAAAGTTGGAACCAGGAAGTCAAGCTTGGGGGCAACAGATTGTGAAAAGGAAGTTTTATATACTGGTACAAACAATTTCCCTAGAAAGAAAAGGTCCACAGACCGGAAATGGAATGATCGGGCTGTTGATAATTTGTTCATTGACAAAACACAGAAGCCTATTCAGTCTAATATAGTAAGTAAGGACAACTTTAGTTGGGCTGGAGAAGTCAAAAGGAAAGACATGGATGTAGTTTCCTTCACGTTTACCACACCATTGACAAGAAACAATGCTGTTGTTGAGACATCTGGGCAAGTTGGCCAGAAGGCTAATGATCTTTCCCTGGATCACTGCATTAAAAGAGTGTTGCTTGACTCAGATAGCGCAACAACTCCAGTTGGATACAATGTGATAGGTGGTGACGCCTTAAGTATTCTTTTAGAACAAAAGCTGAAGGAATTAATGCATGGAATCGAGACATCGTGTAATAGTTCTAAAGCAAGGAAACCTTCCAGTATTGCATCAAACTCAATAGAGCCGGCTTCCTCCCCTAGTTCAGTTAACCTCATGCCAAGATTACAAGAAAAGGACCAAGATGTGCTATCCAGACATTATTCTGATATCTCCCCAACTGGTCTTCCTGAAGTTACTTCAAAAAATAAGACATGGGTTGTTGATGGGATGAAGGAGTTTCGGAGCAATCATATGGAATCACAGTTATTCAATTGCCGACACCCAAGTCCAATCTCTGTTCTTGAAAATTCTTTCTCAACTGAAAGTTGTGAATCTCTAGTCAGCACAGATGCTACTAAAAGCACAGGAGAAAGCAAGTTGTGCTCATCTGTCCAAGCTCAGGAACTTCTTCACTTGAACTGTTCCAGGAAGTTTTATCCAGCTGAAGCTGATACTGAGTTGTCAGATTCAGCTTCCTCAACATCAACTGGAACCGTAGTAAAGAAGCACAGAGGTACATTTTCTATCGTGAACTTTGGAAGATCAAGTACATGGGAATTGGATTATGTGAAAGAAATATTGTGTAACGTAGAATTGATGTTTATGGACTTTGCTCTTGGTCGAGCACGAGAGATTGTGAACCCCCATCTATTCACTCAATTGGAAAGTAGGAAAGAAGGGTTTGAGAGTGATGGCAGTGAGTCTAGGATAAGCAGGAAAGTTATATTTGATGGTGTTAGTGAATGCATGGACTTGCGATGCAGGCGTTACGCAGGTGGGGGGTACAAAATGTGGGCCAAAGGGGTTAAAATGGTGAGAAAGAATGAATGGTTGGCAGAGGAAGTGTACAAGGAAATCTCTGGTTGGAAAGGCATGGGAGATTCAATGGTTGATGAACTTGTAGATAAGGACATGAGCAGCCAGTACGGAAGATGGCTAGATTTTGATGTTGATGCTTTTGAACTAGGAGCAGAGGTTGAGGATCAAATATTTGATTTTTTGGTTGATGAAGTTGTCGCTGAAATCTTGCAATATAACATCTAA 2820 0.4092 MGVEKEGTKGGGKYVGGFFQLFDWTSKSRKKLFATKSGGPESLNQGRKVDGNMAMTQPYMVDEDEIRAGTSFRGSDHSYASSVTDDEACGARVPGVVARLMGLDSLPTSGFPEPDSSPFFDTQSLQDTEYCRKNLNYHLDQSIYSGNLLEKVGGSSRNFTESKPQKTFSRPIEKFQTEVLPPKSAKSIPVTHHRHLSPIKNPGFVPTNNAAYIMEAAARIIEPGPQATAKPKTPLIAPSSVSLKARGLKEKVEASQKGLISGSSSLTSRARDLKEKREVSQRTTRLSEPYKKSVESNAAKYLKGQSLNKSWNGSVDTSIRSTDSEEDLTSKNSGKSISLAIQAKVNVQRREGLSLNGSRDLVGQKEHHEVKSNSLLKNNVQKNLHKKSSVQNTSGVLRQNNQKQNCSIDKGKLPSKPLVSNSHGRKDLSGDSSYGRHRSSSCRSTGKSKVGTRKSSLGATDCEKEVLYTGTNNFPRKKRSTDRKWNDRAVDNLFIDKTQKPIQSNIVSKDNFSWAGEVKRKDMDVVSFTFTTPLTRNNAVVETSGQVGQKANDLSLDHCIKRVLLDSDSATTPVGYNVIGGDALSILLEQKLKELMHGIETSCNSSKARKPSSIASNSIEPASSPSSVNLMPRLQEKDQDVLSRHYSDISPTGLPEVTSKNKTWVVDGMKEFRSNHMESQLFNCRHPSPISVLENSFSTESCESLVSTDATKSTGESKLCSSVQAQELLHLNCSRKFYPAEADTELSDSASSTSTGTVVKKHRGTFSIVNFGRSSTWELDYVKEILCNVELMFMDFALGRAREIVNPHLFTQLESRKEGFESDGSESRISRKVIFDGVSECMDLRCRRYAGGGYKMWAKGVKMVRKNEWLAEEVYKEISGWKGMGDSMVDELVDKDMSSQYGRWLDFDVDAFELGAEVEDQIFDFLVDEVVAEILQYNI 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2606 939 MobiDBLite consensus disorder prediction 310 332 - -
Dere03g2606 939 Pfam DUF761-associated sequence motif 81 111 IPR032795 -
Dere03g2606 939 Pfam Domain of unknown function (DUF4378) 778 929 IPR025486 -
Dere03g2606 939 MobiDBLite consensus disorder prediction 434 455 - -
Dere03g2606 939 MobiDBLite consensus disorder prediction 356 456 - -
Dere03g2606 939 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 933 - -
Dere03g2606 939 MobiDBLite consensus disorder prediction 374 409 - -
Dere03g2606 939 MobiDBLite consensus disorder prediction 602 631 - -
Dere03g2606 939 MobiDBLite consensus disorder prediction 269 289 - -
Dere03g2606 939 MobiDBLite consensus disorder prediction 254 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2606 Dere-ChrDere03 40572097 40576031 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2606 16 935 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 31.190 4.42e-94 315