Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2595 ATGGCAAATAACTCAACGGGGCAACTCGTTGGCTCAGAGATACATGGATTCCATACATTGCGAGAGCTGGATGTTGGGGACATTATGGAGGAAGCAAAAAGCAGATGGCTTCGTCCCAATGAGATTCATGCTATACTTTCCAATTACAAGCATTTCACCATCCATGTCAAGCCAGTGCATTTGCCCCAAAGTGGCACTATTAGATTATTTGATCGCAAGATGCTTAGGAACTTTCGAAAAGATGGACACAACTGGAAAAAGAAAAAGGATGGGAAAACTGTGAAGGAAGCCCATGAGCACTTAAAAGTTGGTAATGAAGAGAGGATCCATGTATACTATGCACATGGCCAGGATAACCCAAGATTTGTTCGCCGATGTTATTGGCTCCTTGATAAGAGTCTGGAACACATAGTGCTAGTTCATTATCGTGAAACACAAGAGTTGCAAGGCTCTCCATCCACGCCTGTAAATTCAAACTCTAGTTTGGCCTCTGATCCAACTGCACCATTGATTTTATCAGAAGAATTAGATTCTGGGACCAATAATCCATATATTGAGGTTAATGACAATTTAAAAGTCAAGAATCATGAACTGAGGCTTCTTGAGCTTAATACACTTGAATGGGATGATCTAGTGTTTACGAATGACCTTAATACTTCTACCACATTTACTGGAGGCACAATTCCATGTTTTGATCGACAAAATCAATCTTTGCTGAATGGCAACTTGAGCAATGTAGCTAGCAATCTGTCTGCAGAAATTCTTTCTTTTGATAATTTAACACAGCCAATTGCTGGGAGCAATAGTGCACCTTATAGTTTTCCTGAAATTGTGAATCTTCAGACATTGGACAATCAAGTAAATCCTAGTGCACAGAAAGGACATTCTATCTCTCTGGGTGGTTTTGATTCCTTGGAAAATTTGGTCAATGACGGTCTGCAGAGTCAGGACAGCTTTGGAAAGTGGATCAACAACATGATTTCTGATTCGCAATGTCCTGTAGATAAGTCAGATCTTGTATCCTCAGTTCCGTCTGTCCAAGAACCATATTCACTGGTAGCGAATCATCAGCAACCTTCTCTGCCAGAACAAGTTTTTAGTCTCACTGATGTCTCACCTGCGTGGGCATCTTCCACAGAAAAGACCAAGATCCTGGTAACTGGAATCTTTCATGATGACTGTCTACACCTTGCAAAGTCCAATCTCTTTTGTGTCTGCGGTGATGTAAGTGTCCAAGCTGAAATTGTTCAGATTGGGGTCTACCGATGTTGGGTATCTCCACATTCCCCTGGATTTGTGAATCTCTATATGAGCTTTGATGGCCATAAGCCCATAAGCCAAGTTGTCAATTTTGAGTATCGTACTCCAATTTTGCATGACCCTGCAGCCTATATGGAAGAGAGGTACAATTGGGATGAGTTTCGACTACAAACAAGGCTTGCTTATTTGCTCTTTGGTACTCAAAAGAGCCTCGATATTTTCTCTAGTAAAGTATCACATGTTGCACTAAAGGAGGCTAAAAACTTTGCCTTCAAGACCTCATTTGTTTCCAAAAGTTGGCAATACTTGATTAAGTCAACTGAAGACAACAAAACTCCATTTCCTCAAGCAAAAGATGCACTGTTTGAAATGTCATTGAAAAACAGACTAAAGGAATGGCTGTTGGAAAGAATTCTCTTCGGCCGTAAGACTAATGAATACGATTCCCAAGGTCAAGGTGTAATCCATCTGTGCACTATGTTGGGATATACTTGGGCTGTTTCCTTATTTTCGTGGTCAGGCTTGTCACTGGATTTCCGTGATAAATTTGGATGGACAGCTCTTCATTGGGCAGCATATTGGGGAAGGGAGAAAATGGTTGCGATGCTGTTGTCTGCTGGGGCAAAGCCTAACTTGGTCACAGATCCTACTCCACAAAATCCCGGTGGATGTACTGCTGCTGATCTTGCTTATATGAAGGGTTATGATGGCTTAGCAGCTTATCTTTCAGAAAAATCTCTGGTTGAGCAGTTCAATGACATGAGCTTAGCTGGAAATATCAGTGGCAAACTGGAAACAAGCACAACCGATCCAGTAGATTATGACAGTCTTACTGAGGACCAGCTATACTTGAAGGATACATTGGCAGCTTACCGGACAACTGCTGAGGCTGCAGCACGTATACAAGCTGCATTTAGGGAGCACTCACTAAAATTACAAACAAAGGCTGTTCAATTTCTAACTCCGGAGGCTGAAGCACGTAGAATAGTTGCAGCAATGAAGATTCAACATGCGTTTCGCAACTATGAGACGAAGAAGATGATGGCAGCTGCTGCTCACATCCAGCATAGGTTCCGGACTTGGAAAATCCGTAAAAATTTTCTCAACATGCGTCGTCAGGCTATCAAGATTCAAGCTGCTTTCCGGGGCTACCAAGTGAGGAAGCAGTATCGCAAAATTCTTTGGTCTGTTGGTGTACTTGAAAAAGCAATCCTGCGTTGGCGATTAAAGAGAAAAGGCTTCCGTGGGCTCCAGGTTAATCTTGTCCCAGAAGAGGAAGATAAGAAGCAAGAAAGTGATACGGAGGAGGACTTCTTCCGGGCTGGTAGACAACAAGCTGAAGAACGTGTGGAGAGATCTGTAATACGTGTTCAGGCCATGTTCCGTTCTAAGAAAGCACAAGAAGAGTATAGAAGGATGAAGCTAGCTCACAATCAAGCAAGGCTGGAACTTGAATATGAAGAGCTGCTCAATTCAGAGTTTGATATGCACTAG 2754 0.4234 MANNSTGQLVGSEIHGFHTLRELDVGDIMEEAKSRWLRPNEIHAILSNYKHFTIHVKPVHLPQSGTIRLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQDNPRFVRRCYWLLDKSLEHIVLVHYRETQELQGSPSTPVNSNSSLASDPTAPLILSEELDSGTNNPYIEVNDNLKVKNHELRLLELNTLEWDDLVFTNDLNTSTTFTGGTIPCFDRQNQSLLNGNLSNVASNLSAEILSFDNLTQPIAGSNSAPYSFPEIVNLQTLDNQVNPSAQKGHSISLGGFDSLENLVNDGLQSQDSFGKWINNMISDSQCPVDKSDLVSSVPSVQEPYSLVANHQQPSLPEQVFSLTDVSPAWASSTEKTKILVTGIFHDDCLHLAKSNLFCVCGDVSVQAEIVQIGVYRCWVSPHSPGFVNLYMSFDGHKPISQVVNFEYRTPILHDPAAYMEERYNWDEFRLQTRLAYLLFGTQKSLDIFSSKVSHVALKEAKNFAFKTSFVSKSWQYLIKSTEDNKTPFPQAKDALFEMSLKNRLKEWLLERILFGRKTNEYDSQGQGVIHLCTMLGYTWAVSLFSWSGLSLDFRDKFGWTALHWAAYWGREKMVAMLLSAGAKPNLVTDPTPQNPGGCTAADLAYMKGYDGLAAYLSEKSLVEQFNDMSLAGNISGKLETSTTDPVDYDSLTEDQLYLKDTLAAYRTTAEAAARIQAAFREHSLKLQTKAVQFLTPEAEARRIVAAMKIQHAFRNYETKKMMAAAAHIQHRFRTWKIRKNFLNMRRQAIKIQAAFRGYQVRKQYRKILWSVGVLEKAILRWRLKRKGFRGLQVNLVPEEEDKKQESDTEEDFFRAGRQQAEERVERSVIRVQAMFRSKKAQEEYRRMKLAHNQARLELEYEELLNSEFDMH 917
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2595 917 ProSiteProfiles Ankyrin repeat profile. 603 635 IPR002110 GO:0005515
Dere03g2595 917 ProSiteProfiles IQ motif profile. 871 899 IPR000048 GO:0005515
Dere03g2595 917 FunFam Calmodulin-binding transcription activator 2 766 814 - -
Dere03g2595 917 Pfam Ankyrin repeats (3 copies) 554 632 IPR002110 GO:0005515
Dere03g2595 917 Pfam IQ calmodulin-binding motif 792 811 IPR000048 GO:0005515
Dere03g2595 917 FunFam calmodulin-binding transcription activator 5 533 673 - -
Dere03g2595 917 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Dere03g2595 917 Gene3D - 764 814 - -
Dere03g2595 917 SUPERFAMILY Ankyrin repeat 552 665 IPR036770 -
Dere03g2595 917 ProSiteProfiles IQ motif profile. 790 814 IPR000048 GO:0005515
Dere03g2595 917 SMART iq_5 789 811 IPR000048 GO:0005515
Dere03g2595 917 SMART iq_5 766 788 IPR000048 GO:0005515
Dere03g2595 917 SMART iq_5 713 735 IPR000048 GO:0005515
Dere03g2595 917 SMART iq_5 869 891 IPR000048 GO:0005515
Dere03g2595 917 ProSiteProfiles IQ motif profile. 767 796 IPR000048 GO:0005515
Dere03g2595 917 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 714 817 IPR027417 -
Dere03g2595 917 Coils Coil 883 903 - -
Dere03g2595 917 Gene3D - 535 672 IPR036770 -
Dere03g2595 917 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Dere03g2595 917 ProSiteProfiles Ankyrin repeat region circular profile. 603 631 - -
Dere03g2595 917 Gene3D Immunoglobulins 362 457 IPR013783 -
Dere03g2595 917 SMART CG_1_2 28 146 IPR005559 GO:0003677
Dere03g2595 917 FunFam Calmodulin-binding transcription activator 5 362 458 - -
Dere03g2595 917 SUPERFAMILY E set domains 368 454 IPR014756 -
Dere03g2595 917 SMART ANK_2a 603 632 IPR002110 GO:0005515
Dere03g2595 917 SMART ANK_2a 642 673 IPR002110 GO:0005515
Dere03g2595 917 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 898 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2595 Dere-ChrDere03 40448426 40458648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2595 28 903 CAMTA Transcription Factor Family AT3G16940 56.769 0.0 953
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Dere03g2595 CG-1 4.9e-46 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g2595 03 40448426 40458648 Dere03g2595 03 40448426 40458648 ECH