Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2574 ATGGCAGACTTGTGCCCTTTCAGCGAGTTCAGTTTTGGTGCTGTAGTTGGGGACAAATATAGTTCATCCAACAACGTTCTCTGGAACACATCAGAAAATCATCATCATCATCATGAAGTACTGAAAGACGTTCAGATTTCAGGAGCAGAAGATTGGGGAGACTCAGGTGGGATGGATTCCCTTTGCTCTATCAACAATTTCGGGTTCTCCTCCGATCATGAATATCCATCACCAGGAGACTACCTCTTATCCAGTATTAATCAACCGAAGGAGCAATTATCGTTTCTGGATTATTGCCCCTTGGATGATCTTCGGTTTGACATGGTTGTCTCTTCACCGTTCGATAGCGTCACCAAGTTTGATGATCAACCTCCAGACATGGTTGATCTCTCCCCACCCACCAAGTTCGACAAGAATTACCAGAACCAGAACCAGGACCTTTCATTCCCTATAGCCTCGCTTGAGCTTCTCAACAACTATGGCAATGGATTCAGACGTTTACACGGTGAAACTGAAACTGAAACTGATCAGAGGAATGTTCAGCTTCAGCCGATTGATGATTTGACAGTAAGGAAGCTCTCAACTGAGGATGTGATGAGACTAGCAGGATCAAGGTTCATCAAATCATCTTCTTCAAATCAATCAGAGGGCTTGAATTCTTTAATTTCCCACCCTTATCATGATTTCTCTCTCTGTGGTCTCTCCGACGAAGAGAAAGAGGACGTGGAGCTCGCGGAATCCCTTCTTGCTTCTGCCGAGAAAGTCGGGTTTCGGCAATTCGAACGAGCAACCAAACTTCTTCACCGCTGCGAATCCATGTCTTCCAAGACCGGGAACGCCGTGAAACGCATCGTTTCGTACTTCTCCGAGGCTCTCCGTGAAAGGATAAATAGAGAAACAGGAAGAGCAAGGGCTCCATTTTCTCTGGTTGGAGAAATTCCCGATCATTATCATAAATACATAGAAACTCCATCCTCATTATTCGATCTTGATAAGTCATTACTGAATTCATGCCCTGCCGCCATCGCATGCCACGAAGAGCTTCCTTTCTCTCAGGTTGTAGAGTTCGCCGGAATCCAAGCCATAGTAGAAAAATTAAACAATTCAAGAAGGATTCACATTATCGATATCGGAATCAAAAGGGGATGGCAATGGACAATTCTTATGCAAGCTCTTCAATCTAAACGTGAATGCCCCCTGGAGCTTTTGAAAATAACAGCAGTAGGAACCACAATGAAGGATGTACTTGAGGATACGGGTAAGAAACTGACGAGTTTTGCTGAGTCCATGAACATATCATTCTCGTTTAACATAGTTGTGGTATCCGATATGCTTGAGCTGAAGGAAGATCTGTTCGAGCTAGATGGCGAGGAAACAATTGCAGTTTACTCTAAGTTCGCACTAAGGTCTATGATCCCACAGCCAGATCAGCTAGAAGCTGTGATGAGAGTGATCAGAAATTTGAACCCGATTGTGATGGTGGTGACGGAGCTTGAAGCGAACTTGAACTCTACGTCTTTCGTGAACCGTTTTACGGAAGCTCTTTTCTTCTTCAGTGCTTTTTTCGATTGTCTTCAGACTTGCATGAAACGGGACGATCCGAACAGGATGGTTTTGGAGTCCTTGTATTTTAGTCATGGGATTAAGAACATTGTAGCGACGGAGGGAGAAGAGAGGAAGGTGAGGAGTGTGAAGATTGATGTATGGAGGGCCTTCTTTGCGAGGTTTGGGATGGCGGAGGAAGAACTGAGTATTTCGTCGTTGTACCAGGCGGAACTGGTGGCTAAGAGATTTGCTTATGGGAGATTTTGTACGTTTGAGATGAATGGACGTTGTTTGCTTTGTGGGTGGAAGGGAACAGCACTTCAGTCTCTTTCTGTGTGGAAATTCCTTTGA 1896 0.4462 MADLCPFSEFSFGAVVGDKYSSSNNVLWNTSENHHHHHEVLKDVQISGAEDWGDSGGMDSLCSINNFGFSSDHEYPSPGDYLLSSINQPKEQLSFLDYCPLDDLRFDMVVSSPFDSVTKFDDQPPDMVDLSPPTKFDKNYQNQNQDLSFPIASLELLNNYGNGFRRLHGETETETDQRNVQLQPIDDLTVRKLSTEDVMRLAGSRFIKSSSSNQSEGLNSLISHPYHDFSLCGLSDEEKEDVELAESLLASAEKVGFRQFERATKLLHRCESMSSKTGNAVKRIVSYFSEALRERINRETGRARAPFSLVGEIPDHYHKYIETPSSLFDLDKSLLNSCPAAIACHEELPFSQVVEFAGIQAIVEKLNNSRRIHIIDIGIKRGWQWTILMQALQSKRECPLELLKITAVGTTMKDVLEDTGKKLTSFAESMNISFSFNIVVVSDMLELKEDLFELDGEETIAVYSKFALRSMIPQPDQLEAVMRVIRNLNPIVMVVTELEANLNSTSFVNRFTEALFFFSAFFDCLQTCMKRDDPNRMVLESLYFSHGIKNIVATEGEERKVRSVKIDVWRAFFARFGMAEEELSISSLYQAELVAKRFAYGRFCTFEMNGRCLLCGWKGTALQSLSVWKFL 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2574 631 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 210 622 IPR005202 -
Dere03g2574 631 ProSiteProfiles GRAS family profile. 235 629 IPR005202 -
Dere03g2574 631 Pfam GRAS domain family 245 629 IPR005202 -
Dere03g2574 631 Coils Coil 235 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2574 Dere-ChrDere03 40172937 40174832 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2574 236 630 GRAS Transcription Factor Family AT1G66350 27.889 1.81e-52 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere03g2574 GRAS 4.2e-83 CL0063