Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2565 ATGATATTCAATACTCATCTCTTGTTTTCTCTGATGATTGCATCCTTGATCATAATTGCTAGCTCGAAATCTTCCCGAGATTTAGATTCTTTCGTCATTTCTTGCGGTCTTTCCTCCAACGTGGATACAGATTCTAATGGACGAAGGTGGCGGTCGGATTATGAATTCCTAACCTCTTCCGCTAACACAATAAACTCAACAGCACAATCCCAAGACCCTTCTCTTCCTTCCCAAATTCCTTACATGTTTGCGAGAATCTTCACTTCCCCAACCACATACAAATTCCAGGTCACTCCCGGACATCGCCACTGGCTTCGACTCCATTTTTATCCTTCAGAATATAGCACTCTTAATCCCTCTGACGCCTATTTTGCTGTTTATGCAAATGACCTTACTCTCCTCAACAATTTCAGCTCTTTCGTCACAGCAGAAGCTTTAACACAAGCCTATTTCGTCAAAGAATACTCCCTTCTACCAATCAAATCTGGTGAACTTAACATCACCTTCGAACCCTCTTTGAAGCACAATGGATCGTACGCTTTTATTAATGGGATTGAGATAATCTCTATGCCTGAGATTTTCATGCCTGCCTTGTTGGTTTCTACTGACCATTTTGTTGATGTTGGGAATACTTCGTTGCAGACTATGTTTCGTTTGAACGTTGGAGGACGGTACATAGCACCAATCAATGACTCTGGCCATATGAGCAGGACATGGTACGATGACAGCCCCTATTTGATTGGAGCAGCAATTAGGGTTGCTTCTGCTACTGATAAGAATGTGACAATTCAATACCCTTCTGATATGCCTCACTCCATCGCCCCTTTGGATGTTTATAGCTCTGCAAGATCCATGGGTCCTAATTCCAGTGTCAATCTGAACTATAACCTCTCTTGGGTTTTTCAGGTTGATCCAAACTTTACCTACGTTGTGAGGCTTCATTTCTGTGAATTGGTGTTCACCAAGATTAACCAAAGGGTTTTTAAAATTTATGTTAATAATCGAACAGCACAAGCAACTGCTGATGTTATAGCATGGACAGGATCCAAAGCGGTTCCTACTTATAAAGACTATGCAATTTATGTCAATGATGAACCTGATGATGAAGAATTATGGGTTGCATTGCACCCTTCTGTTTCAATGAAACCAGAATACTATAATGTCATTCTTAATGGGTTGGAGGTTTTTAAGGTTAGTGAAAATAATAGAAATTTAGCTGGGCTTAATCCTACACCATCTAATATGCTTCTCAAAGATGAAGCTAAAAGAATTAGCGCTTCAAAAATCAATCATGCTCCAATCATAGGAGGGGTTGCTGGAGGAACTGTTGGGGTTGCTTTTGTTGTTGCTATCTGCTTTGTTGTCTATAGAAAAAAAAGACATGATTGTGGGAATGACTCTGTTGTTCGGAATTGGTTGCCTTTATATGTGAACTCTCAAACACCAGGTAGCAAATCAACTATTTCTCGTGGTAGCAGCAATCTTTCAACCTTGAGACAAGGGTTATGGAGACTTTTTTCATTACAAGAGATCAGACATGCTACCATGAACTTCAACGAATCGCAGGTTATTGGTGTTGGTGGGTTTGGGAAAGTCTATAAAGGTATCATAGATGGAGGGATCAAAGTGGCTATAAAAAGATCAAACCCATCTTCTGACCAAGGAGTTATGGAGTTTCGGACAGAAATTGACATGCTTTCAAAGCTGAGGCACAAACATTTGGTCTCTCTAATTGGGTTTTGCGAAGAAAATGGTGAAATGATCCTAGTTTATGATCTCATGGTCAATGGAACTTTGAGAGAACACCTTTACAAGAGCAACAAGCCAGCTTTACCATGGAAGCAGAGGCTAGAAATCTGCATTGGAGCAGCAAGAGGGCTTCACTACCTTCACACAGGTGCCAAGTTCATCATCATTCATAGGGATGTGAAAACCACAAATATACTATTAAATGATAAATGGGTAGCAAAAGTTTCTGATTTTGGGCTATCCAGAACAGGTCCTAATCTGCACCAAACCCATGTGAGCACAGTGGTGAAAGGTAGCTTCGGATACTTAGATCCTGAGTACTTCAGGAGACAGCAACTCACAGAAAAATCTGATGTTTACTCTTTTGGGGTGGTACTTTTTGAAGTGTTTTGTGCAAGGCCAGCACTAGATCCTAGCTTGCCTAAAGAACAAGTAAGCCTAGCAGATTGGGCTTTACTGTGTCAAAGGAAGGGGACTCTATATGGTATTATTGATCCTAAACTTAGAGGCGAAATCAACCCTCAGTGCTTGAAAAAATTTGCAGAGACTGCTCTGAAGTGTATAGCTGACCATGGGGTTGAAAGGCCTTCAATGGGTGATGTGTTGTGGAACCTTGAGTTTGCACTTCAGTTGCAGGAGAATCCAGGTGGAGGGGAACATGCAGCGGAAGAGAAGGCAAATGATGCTTATGCTATTCACAATGCCATTGCTATGTTGAACATTGAAGAAGGGAGTACAAGTGCAAGAACCAATGAAACTGATGATTCTAGCGTAGTTTTTTCACAAATTTTTGAGCAAAGAGGAAGATGA 2559 0.4095 MIFNTHLLFSLMIASLIIIASSKSSRDLDSFVISCGLSSNVDTDSNGRRWRSDYEFLTSSANTINSTAQSQDPSLPSQIPYMFARIFTSPTTYKFQVTPGHRHWLRLHFYPSEYSTLNPSDAYFAVYANDLTLLNNFSSFVTAEALTQAYFVKEYSLLPIKSGELNITFEPSLKHNGSYAFINGIEIISMPEIFMPALLVSTDHFVDVGNTSLQTMFRLNVGGRYIAPINDSGHMSRTWYDDSPYLIGAAIRVASATDKNVTIQYPSDMPHSIAPLDVYSSARSMGPNSSVNLNYNLSWVFQVDPNFTYVVRLHFCELVFTKINQRVFKIYVNNRTAQATADVIAWTGSKAVPTYKDYAIYVNDEPDDEELWVALHPSVSMKPEYYNVILNGLEVFKVSENNRNLAGLNPTPSNMLLKDEAKRISASKINHAPIIGGVAGGTVGVAFVVAICFVVYRKKRHDCGNDSVVRNWLPLYVNSQTPGSKSTISRGSSNLSTLRQGLWRLFSLQEIRHATMNFNESQVIGVGGFGKVYKGIIDGGIKVAIKRSNPSSDQGVMEFRTEIDMLSKLRHKHLVSLIGFCEENGEMILVYDLMVNGTLREHLYKSNKPALPWKQRLEICIGAARGLHYLHTGAKFIIIHRDVKTTNILLNDKWVAKVSDFGLSRTGPNLHQTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVFCARPALDPSLPKEQVSLADWALLCQRKGTLYGIIDPKLRGEINPQCLKKFAETALKCIADHGVERPSMGDVLWNLEFALQLQENPGGGEHAAEEKANDAYAIHNAIAMLNIEEGSTSARTNETDDSSVVFSQIFEQRGR 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2565 852 Pfam Protein tyrosine and serine/threonine kinase 521 785 IPR001245 GO:0004672|GO:0006468
Dere03g2565 852 Gene3D Transferase(Phosphotransferase) domain 1 594 812 - -
Dere03g2565 852 FunFam FERONIA receptor-like kinase 30 191 - -
Dere03g2565 852 ProSitePatterns Protein kinases ATP-binding region signature. 524 546 IPR017441 GO:0005524
Dere03g2565 852 Pfam Malectin-like domain 33 398 IPR024788 -
Dere03g2565 852 Gene3D - 212 400 - -
Dere03g2565 852 Gene3D - 30 191 - -
Dere03g2565 852 ProSiteProfiles Protein kinase domain profile. 518 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2565 852 SMART serkin_6 518 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2565 852 SUPERFAMILY Protein kinase-like (PK-like) 494 791 IPR011009 -
Dere03g2565 852 CDD STKc_IRAK 524 789 - -
Dere03g2565 852 Gene3D Phosphorylase Kinase; domain 1 481 593 - -
Dere03g2565 852 FunFam receptor-like protein kinase FERONIA 481 593 - -
Dere03g2565 852 FunFam Receptor-like protein kinase FERONIA 594 810 - -
Dere03g2565 852 FunFam FERONIA receptor-like kinase 211 399 - -
Dere03g2565 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Dere03g2565 852 PANTHER OS03G0124300 PROTEIN-RELATED 6 465 IPR046957 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2565 Dere-ChrDere03 40084980 40087538 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2565 13 852 Receptor kinase-like Gene Family AT3G51550 53.167 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Dere03g2565 Malectin_like 3e-41 CL0202