Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2553 ATGCTTCAGGCATTGATGAATCTTCTCTCTGTGTGTTGGAAGCCATTAGGGCGTGATGCTGAGAATTGTGATTCCATTGGAGTTATCGGCAGCAGTTTCGCCGGTGGGGTCGGTGGCAGAGAAGGTAAAGACGGCTTACTTTGGTTCCGAGATATCGGAAAGCATGGCTTCGGTGAATTCTCCATGGCGGTGGTCCAGGCAAACCAGGTTCTCGAAGACCAAAGCCAGATCGAGTCTGGCCCTTTGGGCACCTTTGTCGGCGTATACGATGGCCATGGAGGCCCCGTTGCGTCTCGATACGTTTGCGATCACTTGTTTCGGCATTTTCAAGCAATATCAGCTGAGTCACAAGGAGTTGTGACAACTGAGACCATTGAAAGAGCATTTCGCCTAACAGAAGAGGGATTCACTGACCTTGTGTCTGAATTATGGAGTACTCGACCTGATATTGCTACTGCTGGGTCATGTTGTCTGGTTGGAGTGATTTTTCAGCAGACCTTATTTGTGGCAAACCTTGGAGATTCCCGTGTTGTATTGGGTAAGAAAGTTGGCAACACTGGAGTTGTTGCTGCAGTTCAGCTTTCCACTGAACACAATGCAAATATTGAGGCTGTTAGACAGGAACTTAAAGAATTGCACCCAAATGATCCCCAAATTGTTGTCCTCAAACATGGGGTGTGGAGAGTAAAAGGCATTATTCAGGTTTCTAGATCTATAGGTGACGTATACATGAAAAATGCGCAATATAACCGGGAACCGATTAATGCAAAATTCAGACTTCCTGAACCAATGAACATGCCTATCTTGTCTGCTAATCCAACTATTATTTCTCATACTCTCCAACCAAATGATTCCTTCCTTATATTTGCATCAGATGGATTATGGGAGCACTTGAGTAATGAAAAAGCAGTTGATATTGTTCACAGCCACCCACATGCAGGTAGCGCCAAGAGACTTATCAAGGCTGCCCTCCATGAAGCAGCAAGAAAAAGAGAAATGAGATATTCAGACCTCCACAAGATTGACAAGAAAGTTCGTCGCCATTTTCATGATGACATAACTGTTATTGTTTTATTCTTAAACCACGACCTTATATCCAAAGGCACAGTTCTAGACCCTCCACTCTCAATTCGAAGTGCTCTTGATCACTAA 1152 0.4444 MLQALMNLLSVCWKPLGRDAENCDSIGVIGSSFAGGVGGREGKDGLLWFRDIGKHGFGEFSMAVVQANQVLEDQSQIESGPLGTFVGVYDGHGGPVASRYVCDHLFRHFQAISAESQGVVTTETIERAFRLTEEGFTDLVSELWSTRPDIATAGSCCLVGVIFQQTLFVANLGDSRVVLGKKVGNTGVVAAVQLSTEHNANIEAVRQELKELHPNDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKNAQYNREPINAKFRLPEPMNMPILSANPTIISHTLQPNDSFLIFASDGLWEHLSNEKAVDIVHSHPHAGSAKRLIKAALHEAARKREMRYSDLHKIDKKVRRHFHDDITVIVLFLNHDLISKGTVLDPPLSIRSALDH 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2553 383 Gene3D - 49 369 IPR036457 -
Dere03g2553 383 SMART PP2C_4 51 358 IPR001932 -
Dere03g2553 383 ProSiteProfiles PPM-type phosphatase domain profile. 56 360 IPR001932 -
Dere03g2553 383 PANTHER PROTEIN PHOSPHATASE 51 358 IPR015655 GO:0004722|GO:0006470
Dere03g2553 383 FunFam Probable protein phosphatase 2C 42 50 368 - -
Dere03g2553 383 ProSitePatterns PPM-type phosphatase domain signature. 85 93 IPR000222 GO:0043169
Dere03g2553 383 SUPERFAMILY PP2C-like 68 361 IPR036457 -
Dere03g2553 383 CDD PP2Cc 57 360 IPR001932 -
Dere03g2553 383 Pfam Protein phosphatase 2C 81 330 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2553 Dere-ChrDere03 39917251 39922404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2553 1 380 PP2C-type Phosphatase Gene Family AT4G38520 59.383 8.51e-163 460
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g2553 03 39917251 39922404 Dere03g2553 03 39917251 39922404 ECH