Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere03g2545 | ATGGAGGAAAAGAGAGAGGAAGAAGAGAGCAACAAGAGTTGGAGCATGGCAAACTCTGTGGCATTTTCCGACGAGATTCCGATGATGAGCTTTCCCCCACCTCCTGCTTTTTCTAACATCTCTGACATGATGATGATGCCTCTATCTGACAATGATTACAAGCCTAATTACTCCTCTGCCTTCTTGGATTTGCTGGCTCTCCAAGATTACAGCCCTTCCTTGTTCGATTGCCTCCCTTCCTTCGCCACCCACTGCCCCCTTCCGTCGCCGGCGAGTTCCAACGTCCCCGAATCCTCCGAGGTCTTGAACACTACTCCGGCATCCCCCAATTCCTCCTCTATCTCCTCTTCCTCCAATGAAGCCCCTCTCACCAATATCATAATGGAGCAGCCCCGCGCTAGCAGTAAAGAAGGGAACGAACTCGAACCCGAGGATGAAGAGCACGGAGAAGCAGCCGGAGGAGAGGACCCCGATCAACACAAGACTAAGAAACAGCTGAAACCGAAAAAGAAGAACCAGAAGAAGCAAAGAGAGCCCAGATTTGCGTTCATGACAAAGAGCGAAGTGGATCACCTAGACGATGGCTATAGGTGGCGCAAGTACGGCCAAAAAGCTGTAAAAAACAGCCCCTACCCCAGGAGCTATTATCGTTGCACCACCGCGGGATGCGGCGTGAAGAAGCGGGTGGAGCGGTCGTCGGAGAACTCGGCGATCGTGATGACGACGTACGAGGGGCAGCACACCCACCCGAGTCCGGTGACGTGCCGGGCGAGCCTGGGGTTCGGAGGCACGAGCGGTGGTGGGCTTGGTTCGGCACACTATGTAGTGCCACAAGCAAAGCATCAGCATCAGCATCAGCATCATCAGCAGCAACAACAGCATGTGCAACAACAAGCGGCTGCTTTGTTGTATAGCTCAGCCCCACTACTTCCTTTGAGTATTAGCCCATCCTCTCCTAGTTATAAGGATCCCACGTCGTCGTTTTCTGGCTTGCTTCAAGACAACCCTCATCATCATCATCGTCATGACGTAGGTTTTAGACCATCGTCGTCTCATCCTCAAGCTACTTTGTCAAGGGACAATGGGCTTCTTCAGGACATTATTGTGCCAACGCAGATGAGGAAGGAGGAGAAAGAAGAAGATGAACAAGAAGAAGAAAAATAG | 1164 | 0.5189 | MEEKREEEESNKSWSMANSVAFSDEIPMMSFPPPPAFSNISDMMMMPLSDNDYKPNYSSAFLDLLALQDYSPSLFDCLPSFATHCPLPSPASSNVPESSEVLNTTPASPNSSSISSSSNEAPLTNIIMEQPRASSKEGNELEPEDEEHGEAAGGEDPDQHKTKKQLKPKKKNQKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPYPRSYYRCTTAGCGVKKRVERSSENSAIVMTTYEGQHTHPSPVTCRASLGFGGTSGGGLGSAHYVVPQAKHQHQHQHHQQQQQHVQQQAAALLYSSAPLLPLSISPSSPSYKDPTSSFSGLLQDNPHHHHRHDVGFRPSSSHPQATLSRDNGLLQDIIVPTQMRKEEKEEDEQEEEK | 387 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere03g2545 | 387 | ProSiteProfiles | WRKY domain profile. | 187 | 252 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dere03g2545 | 387 | SUPERFAMILY | WRKY DNA-binding domain | 184 | 252 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dere03g2545 | 387 | SMART | WRKY_cls | 192 | 251 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Dere03g2545 | 387 | MobiDBLite | consensus disorder prediction | 89 | 181 | - | - | |
Dere03g2545 | 387 | MobiDBLite | consensus disorder prediction | 315 | 333 | - | - | |
Dere03g2545 | 387 | Gene3D | WRKY domain | 176 | 253 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Dere03g2545 | 387 | MobiDBLite | consensus disorder prediction | 89 | 132 | - | - | |
Dere03g2545 | 387 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 95 | 294 | IPR044810 | GO:0003700 | |
Dere03g2545 | 387 | MobiDBLite | consensus disorder prediction | 315 | 387 | - | - | |
Dere03g2545 | 387 | FunFam | WRKY transcription factor 57 | 178 | 252 | - | - | |
Dere03g2545 | 387 | Pfam | WRKY DNA -binding domain | 193 | 250 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere03g2545 | Dere-ChrDere03 | 39786096 | 39787632 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere03g2545 | 162 | 377 | WRKY Transcription Factor Family | AT2G47260 | 48.636 | 1.88e-53 | 179 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Dere03g2545 | WRKY | 3.6e-26 | CL0274 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dere03g2545 | 03 | 39786096 | 39787632 | Dere03g2545 | 03 | 39786096 | 39787632 | ECH |