Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2515 ATGGGAAGCGATTCCCTGGACCGTTTGTTGGTGGCCGAAGAAATTATCTGTCAGCAGAGCATTCCTGTGTTAGATGTGAAGTATCATCTTTGCATAACACAAGAACACAACGTCAAGGTCGAGGTTTCGCCCACGTCGCCTTCTGTTCCGATCTTTGGCCAAGTACGGGTTTCTTCGGAATCCGCTTCTTCTGAAACGTGCCGCTTTGAAACAGCTGAGAGTTGCTTCAAGATGATTAAAGATCCCATCTTAGAGATCTCTTCAACCAAATTCATCCCAAATGTCCGATCTGGTAGCCACGCTGATATTGGACCCCGGGGATCTATGGATGATGAACACATTCAAATAGATGATCTGGCTTCCCATCTTGGATTTGTGTTCAAGTCTCCAATACCAAGTGCTTTTTATGCAGTTTTTGACGGTCATGGAGGGCCTGATGCAGCCTATTTCATTAAAACGAATGCTATGAGACTATTTTTTGAAGATGCTAATCTGCTGCAGTCGTATGATACTGATGCATTATTTCTAAAGAAATTGGAGGATTCCCATCGGAGAGCATTTTTACTTGCAGACCTTGCCTTGGCTGATGAAGAAACTGTTAGTAGTTCCTGTGGGACAACAGCTTTGACTGCGCTTATACTTGGAAGGCATTTAGTGGTTGCTAATGCTGGTGATTGTCGGGCAGTTCTCTGCAGAAGAGGAGCAGCTGTTGAGTTGTCTCATGATCATAGACCGAGCTATTTACCAGAAAAGAGGAGAGTGGAGGAGTTAGGTGGTTTCATTGATGATGGGTATCTCAATCGTTGCCTTTCTGTGACCCGAGCCCTTGGGGATTGGGACTTAAAATTCCCCTTTGGTTCTGCTTCGCCTCTTATTGCTGATCCGGATGTTCGGCAAGTTACATTAACAGAGGATGATGAGTTCTTGATCATTGGGTGTGATGGGATTTGGGATGTGATGTCTAGTCAGGATGCAGTTAGTCTTGTCCGCCGTGGGTTAAGAAGGCATGATGATCCAGAGCAAAGTGCCAGAGAGCTAGTCAAGGAAGCACTGCGCTTAAATACATCCGATAATCTCACTGTGATTGTTATATGCTTGTCTTCTATTGAAAGCATAGTTGAATCATGTCCACCCCGAAGGCAAAGATTTAGAGCTTGCTGTCTGTCCGAAGAGGCTCGTAACAAATTGAAGAGCCTACTGGAGGGCAATTAA 1212 0.4488 MGSDSLDRLLVAEEIICQQSIPVLDVKYHLCITQEHNVKVEVSPTSPSVPIFGQVRVSSESASSETCRFETAESCFKMIKDPILEISSTKFIPNVRSGSHADIGPRGSMDDEHIQIDDLASHLGFVFKSPIPSAFYAVFDGHGGPDAAYFIKTNAMRLFFEDANLLQSYDTDALFLKKLEDSHRRAFLLADLALADEETVSSSCGTTALTALILGRHLVVANAGDCRAVLCRRGAAVELSHDHRPSYLPEKRRVEELGGFIDDGYLNRCLSVTRALGDWDLKFPFGSASPLIADPDVRQVTLTEDDEFLIIGCDGIWDVMSSQDAVSLVRRGLRRHDDPEQSARELVKEALRLNTSDNLTVIVICLSSIESIVESCPPRRQRFRACCLSEEARNKLKSLLEGN 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2515 403 FunFam Probable protein phosphatase 2C 22 81 369 - -
Dere03g2515 403 Pfam Protein phosphatase 2C 104 358 IPR001932 -
Dere03g2515 403 Gene3D - 85 371 IPR036457 -
Dere03g2515 403 ProSiteProfiles PPM-type phosphatase domain profile. 96 366 IPR001932 -
Dere03g2515 403 ProSitePatterns PPM-type phosphatase domain signature. 135 143 IPR000222 GO:0043169
Dere03g2515 403 PANTHER PROTEIN PHOSPHATASE 2C 75 364 IPR015655 GO:0004722|GO:0006470
Dere03g2515 403 SMART PP2C_SIG_2 111 366 IPR001932 -
Dere03g2515 403 CDD PP2Cc 95 366 IPR001932 -
Dere03g2515 403 SMART PP2C_4 86 364 IPR001932 -
Dere03g2515 403 SUPERFAMILY PP2C-like 88 367 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2515 Dere-ChrDere03 39471559 39476411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2515 9 402 PP2C-type Phosphatase Gene Family AT1G48040 56.423 2.94e-149 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g2515 03 39471559 39476411 Dere03g2515 03 39471559 39476411 ECH