Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2506 ATGGAATTGAGCTGGCCCGTTATTATATCATGTTGGTCAAACAAAACAAGTTGGACACCTGGGTTTCAAGGCGTAGTGCAGCTTCCAGAAGGCATTAATTATACTCGAAAATTCTTGATGGCTATTGTCTCGTATAAAACGCCGAAGCAAGAAACGTTTTGGTGGAATATGGAAGCTGAGGCTACTACTACGCCAGAGTTTGCGCTGGCCGATACGGATATCAACTGGGACAGGTTGGATAAGACCAAGTTTCATGTCATCGGTGCAATACTCTTTACTGTACAATCAGCCTTGCTTCATCCAACAGCAGTTGTAAAGACAAGAATGCAAGTAGCTGGATCTGGACTCTCTCACATGAGAGGAACATCAGTATTTGTTCACATATTGAAAAACGATGGTATTCCTGGACTCTTTAGAGGTTTTGGTACTTCTGCTATTGGATCACTGCCTGGTAGGGTCCTAGCTCTAACATCACTTGAGATGTCAAAAGACTTTATGTTAAAATACACTGAAGGATTTGATATGCCGGAAGCCTCACGTGTTGGCCTTGCAAATGGAGTGGCAGGCATGTTCTCAAATTTAGTATCTTGTGTATACTATGTGCCTTTGGATGTGATCTGCCAGAGGCTAATGGTACAAGGTCTTCCTGGAACTACATACTGCAGTGGGGCATTTGATGTTGTTCGTAAAGTTATGAAGGCTGAGGGATTTCGTGGCTTATATAGAGGCTTTGGATTAACAGCTGTAACCCAGTCACCAGCATCTGCACTTTGGTGGGGTTCATATGGTGCAGCACAACACATCATTTGGAGGAGTTTGGGCTATAGAGATGCCATGGAGAAAAAACCTTCACATATGGAGATGGTGGCTGTCCAAGCTACGGCAGGGATGGTGGCTGGTGCTTGTTCCTCTGTTATAACTACCCCCATTGATACTGTAAAAACTCGGCTTCAGGTTATGGACAACTATGGTGTTGGAAGACCATCAGTCTTGAAGACAACAAAGACACTCCTCAAGGAAGATGGATGGTGGGGGTTCTACAGGGGGTTTGGACCTCGATTTTTGAATATGTCACTTTATGGAACTACAATGATTGTTACTTATGAACTGATAACTAAGGTTGGTGTTTTCTTTCTTTCTTTCCCTTTTAACAGAAAGATTATCAGTACAACGGAGTCTGGGATCATTTGCTTGAAGAAGCACGATGTGCTCTTCTACACTACACCTTGTTTAGCAAGCGATTTGATGGTAGAAACGATTCCATCTGTACGCGCTCAACTCATTTTGGTTTCTCCCTCTTTGATCTCTCTCCTTTACTACCATCGTAAGTTGTTCTCATTCAATTCTGGGTTCAATTTTTCTTAG 1365 0.4286 MELSWPVIISCWSNKTSWTPGFQGVVQLPEGINYTRKFLMAIVSYKTPKQETFWWNMEAEATTTPEFALADTDINWDRLDKTKFHVIGAILFTVQSALLHPTAVVKTRMQVAGSGLSHMRGTSVFVHILKNDGIPGLFRGFGTSAIGSLPGRVLALTSLEMSKDFMLKYTEGFDMPEASRVGLANGVAGMFSNLVSCVYYVPLDVICQRLMVQGLPGTTYCSGAFDVVRKVMKAEGFRGLYRGFGLTAVTQSPASALWWGSYGAAQHIIWRSLGYRDAMEKKPSHMEMVAVQATAGMVAGACSSVITTPIDTVKTRLQVMDNYGVGRPSVLKTTKTLLKEDGWWGFYRGFGPRFLNMSLYGTTMIVTYELITKVGVFFLSFPFNRKIISTTESGIICLKKHDVLFYTTPCLASDLMVETIPSVRAQLILVSPSLISLLYYHRKLFSFNSGFNFS 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2506 454 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 65 374 - -
Dere03g2506 454 Gene3D Mitochondrial carrier domain 86 376 IPR023395 -
Dere03g2506 454 Pfam Mitochondrial carrier protein 184 270 IPR018108 -
Dere03g2506 454 Pfam Mitochondrial carrier protein 290 373 IPR018108 -
Dere03g2506 454 Pfam Mitochondrial carrier protein 86 169 IPR018108 -
Dere03g2506 454 ProSiteProfiles Solute carrier (Solcar) repeat profile. 180 268 IPR018108 -
Dere03g2506 454 SUPERFAMILY Mitochondrial carrier 77 370 IPR023395 -
Dere03g2506 454 ProSiteProfiles Solute carrier (Solcar) repeat profile. 79 165 IPR018108 -
Dere03g2506 454 ProSiteProfiles Solute carrier (Solcar) repeat profile. 287 374 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2506 Dere-ChrDere03 39220178 39228222 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2506 71 374 Chloroplast and Mitochondria Gene Families AT5G15640 50.163 1.51e-101 304