Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2495 ATGGGTTGCTTTGGCTGTTGCAAAAGAAGTGACGTTTATACAGAAGCTGATAATAAATCCTTTATGCCACACAATCCTGCAGGGAGCACTGGTTATCCTAGAAGAGAAGCTATAACAAGAACCACTCCGTCTACTGTACATTTTCAACCCATTTCTGTCCCTTCCCTTTCAGTGGATGAATTAAAGTCCGTGACAGATAATTTTGGCACTAAATCTTTCATTGGGGAGGGGGCATATGGCAAAGTATATTATGCTGTATTGAGAAATGGCCGTGCTGTGGCTGTAAAAAAGTTGGACTCCAGTAAGCAACCAGAACAAAAATTTCTTGCACAGGTCTCCATTGTATCAAGGCTAAGGCATGAAAACGTTATTGAGCTTGTTGGTTATTGTTTTGATGGTCCTCTTCGTGCCCTAGCCTACGAGTATGCTCCTAAAGGATCACTTCATGATATTCTACATGGTCGCAAAGGTGAGAAGGGTGCACAACCTGGTCCAGTTTTATCATGGGTACAAAGAGTTAAAATTGCTGTTGGAGCGGCTAGAGGACTTGAATATCTGCATGAAAAAGCAGAGACTCATATCATCCATCGCTATATCAAGTCCTGCAATATAATGCTTTTTGATGATGACATTTCAAAGATTGCTGATTTTGATTTGTCAAATCAAGCCCCCGATGAGGCAGCGCGTGTCCATTCTACTCGTGTTCTCGGAACCTTCGGTTATTATGCTCCAGAATTTGCAATGACTGGAGATCTCACTATAAAAAGTGACATTTATAGTTTTGGAGTTATACTGTTGGAACTCTTGACTGGGCGTAAACCCGTTGACTATACACTGCCACGAGGGCAACAAAGCCTTGTGACTTGGGCAACACCAAAACTCAGTGAAGATAAAGTAAGGCAGTGCGTGGATGCCAGATTAGAGGATGACTACCCTCCAAAGGCTGTTGCAAAGATGGCTGCTGTTGCTGCATTGTGTTTGCAATATGAAGCTGGGTTAAGGCCAAATATGAGCATCGTAGTTAAAGCTTTACAACCTCTATTAAATGCTCGTTCTGTTCAGCCAAAGGAAAAGTACTGA 1080 0.4231 MGCFGCCKRSDVYTEADNKSFMPHNPAGSTGYPRREAITRTTPSTVHFQPISVPSLSVDELKSVTDNFGTKSFIGEGAYGKVYYAVLRNGRAVAVKKLDSSKQPEQKFLAQVSIVSRLRHENVIELVGYCFDGPLRALAYEYAPKGSLHDILHGRKGEKGAQPGPVLSWVQRVKIAVGAARGLEYLHEKAETHIIHRYIKSCNIMLFDDDISKIADFDLSNQAPDEAARVHSTRVLGTFGYYAPEFAMTGDLTIKSDIYSFGVILLELLTGRKPVDYTLPRGQQSLVTWATPKLSEDKVRQCVDARLEDDYPPKAVAKMAAVAALCLQYEAGLRPNMSIVVKALQPLLNARSVQPKEKY 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2495 359 Pfam Protein tyrosine and serine/threonine kinase 72 344 IPR001245 GO:0004672|GO:0006468
Dere03g2495 359 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 4 351 - -
Dere03g2495 359 SUPERFAMILY Protein kinase-like (PK-like) 43 344 IPR011009 -
Dere03g2495 359 Gene3D Phosphorylase Kinase; domain 1 31 142 - -
Dere03g2495 359 FunFam pto-interacting protein 1 144 355 - -
Dere03g2495 359 PIRSF ILK 29 358 - -
Dere03g2495 359 Gene3D Transferase(Phosphotransferase) domain 1 144 358 - -
Dere03g2495 359 ProSiteProfiles Protein kinase domain profile. 68 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2495 359 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2495 Dere-ChrDere03 39103074 39105744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2495 49 345 Receptor kinase-like Gene Family AT4G02010 47.841 1.73e-86 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Dere03g2495 PK_Tyr_Ser-Thr 8.5e-45 CL0016