Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2491 ATGGCTTACATTCGCGAGGACTTTTGGGGCTTAAGAGATCTCGTAGCTGCGTCACTTCTGAAAGTCTGTGAAGGATTAGGGTCGTGTACTATAGGTATCGATTTGAGAGTTTTCAGTAAAGTTTTCTTGCATTTTCGTGCTCTTCTGGACAACTACGATTTTCTGAAAAAATTGAAAACGAATTGTTGCCATTTTTCTTGCACGCCCCTGGTGCTTATGTGCTTGATTTGTCGGGGATATGAAAAACGGGGCCAAGCGTCTAGTTTTCTTTCTTTTTTCACTCTGATATTTGGCATCAGCATGGCGTCTGGTATGAATTCAGGGTTATATAAGAAAACTTCTGTTTTTGGTTTTAAAGTGTGGGAAATAATGGGATTGACCGTTGGGTTATTCATTATAATCATTCTTGTGGTGCTATCAATATGTCTTACAATGCGAAAGAAATCCAGAAAAATCAACAACAGCGTGCTTTCCCTTAGCCATATATTATCGGTTTCAGAAGAGATCAAAGAGATTAGAGTTGATCAAGTTTCAGCAAATAATCATATGCAGAATGGTGCGAGTTTGAATGACAAATTTAATGACAGGGAGTGTGCAAAGGTTTTGATCCAAACGAAGAATAGGGATAATCATATTAGTAGTCTGTCAGGCTCATTTAATCATTTAGAGAAAGATGGTGCTGGTTCTCAATCAGGCGAAGACAGCGGCTCTAAGACCATTTCTTCTTACAGCCCCTTGTCTGGTTTGCCTGAATTCTCTCAACTTGGCTGGGGTCACTGGTTTACACTAAGGGACCTAGAACTTGCAACAAACAGGTTTTCAAGAGACAATGTGATTGGGGAAGGTGGATATGGAGTTGTTTATCAAGGTCAACTAATCAATGGGAATCCTGTGGCCGTTAAGAAGATCCTCAATAATTTAGGACAGGCTGAAAAGGAATTTAGGGTGGAAGTTGAGGCTATTGGTCATGTGCGACATAAGCATTTGGTTCGACTTCTTGGATACTGCATTGAAGGCACTCACAGGTTGTTGGTTTATGAGTACGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCAGAAGCATGGGTATCTTACTTGGGATGCTCGGATGAAAATTCTCCTCGGGACAGCTAAAGCGCTGGCTTACTTGCATGAAGCAATTGAGCCAAAGGTTGTACATCGTGACATTAAATCAAGCAATATTCTAATCGATGATGAATTCAATGCCAAAATATCTGACTTTGGGTTGGCTAAATTACTGGGTGCTGGGAAAAGTCATATTACAACTCGAGTAATGGGTACTTTTGGATATGTGGCTCCAGAATATGCCAATTCTGGCTTACTAAATGAGAAGAGTGATGTTTATAGCTTTGGAGTGTTGCTCCTTGAAGCAATCACTGGAAGAGACCCTGTGGATTATGGCGGACCAGCGGATGAGGTGAATTTGGTTGACTGGCTCAAGATGATGGTAGGGAATAGGCGTTCGGAAGAGGTGGTGGACCCAAAACTTGAGGCTAGGCCATCAACAAGTGCCCTTAAACGTGCCCTTTTGACTGCTCTTAGGTGTGTTGATCCAGATGCTGGAAAAAGACCAAAGATGAGTCAAGTTGTCCGCATGCTTGAATCAGAAGAATATCCCATACCTCGTGAGGATCGAAGACGGCGAAAGAACCAGGCAGGAAGCATGGAAGTGGAGACCTACGGAGAAACTTCTGATACAGAAAGAGTGACAATCCAGATTACAGGTCAAATGGCAGAAGGAACCAGAGGAAATAGAGCCAGGGGGTTCTCGTTATCCAAATCAAGGGATTCAAGACACAAGTGA 1836 0.4232 MAYIREDFWGLRDLVAASLLKVCEGLGSCTIGIDLRVFSKVFLHFRALLDNYDFLKKLKTNCCHFSCTPLVLMCLICRGYEKRGQASSFLSFFTLIFGISMASGMNSGLYKKTSVFGFKVWEIMGLTVGLFIIIILVVLSICLTMRKKSRKINNSVLSLSHILSVSEEIKEIRVDQVSANNHMQNGASLNDKFNDRECAKVLIQTKNRDNHISSLSGSFNHLEKDGAGSQSGEDSGSKTISSYSPLSGLPEFSQLGWGHWFTLRDLELATNRFSRDNVIGEGGYGVVYQGQLINGNPVAVKKILNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCIEGTHRLLVYEYVNNGNLEQWLHGAMQKHGYLTWDARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYGGPADEVNLVDWLKMMVGNRRSEEVVDPKLEARPSTSALKRALLTALRCVDPDAGKRPKMSQVVRMLESEEYPIPREDRRRRKNQAGSMEVETYGETSDTERVTIQITGQMAEGTRGNRARGFSLSKSRDSRHK 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2491 611 MobiDBLite consensus disorder prediction 551 611 - -
Dere03g2491 611 FunFam Putative receptor-like protein kinase 255 348 - -
Dere03g2491 611 Gene3D Phosphorylase Kinase; domain 1 252 348 - -
Dere03g2491 611 FunFam Putative receptor-like serine/threonine-protein kinase 349 560 - -
Dere03g2491 611 Pfam Protein kinase domain 274 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2491 611 PANTHER OS01G0323000 PROTEIN 104 568 - -
Dere03g2491 611 MobiDBLite consensus disorder prediction 567 590 - -
Dere03g2491 611 Gene3D Transferase(Phosphotransferase) domain 1 349 561 - -
Dere03g2491 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 395 407 IPR008271 GO:0004672|GO:0006468
Dere03g2491 611 MobiDBLite consensus disorder prediction 223 242 - -
Dere03g2491 611 CDD STKc_IRAK 279 545 - -
Dere03g2491 611 SUPERFAMILY Protein kinase-like (PK-like) 257 552 IPR011009 -
Dere03g2491 611 ProSiteProfiles Protein kinase domain profile. 273 550 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2491 611 ProSitePatterns Protein kinases ATP-binding region signature. 279 302 IPR017441 GO:0005524
Dere03g2491 611 SMART serkin_6 273 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2491 Dere-ChrDere03 38946592 38950533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2491 117 547 Trihelix Transcription Factor Family AT1G70460 42.661 1.49e-93 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Dere03g2491 Pkinase 8.5e-48 CL0016