Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2479 ATGGTGATCGTGAAGCTTGGGAAGAAGAACGAGAAGGGGAAGCAAGGGCAGGGAATGCGACTAGGGAAATACGAGCTTGGTAGGACTTTGGGCGAAGGAAATTTCGGAAAAGTCAAATTAGCGAGGAACACCGATTCCGGCCAACCCTTCGCGGTTAAGATAATCGAGAAGAGCAAGATCACTGACCTCAACATAGCCGATCAGATTAAGAGGGAAATCGCCACCTTGAAGCTCTTGAAGCATCCGAACGTGGTCAGATTATACGAGGTTTTGGCCAGCAAGACCAAGATTTATATGGTCCTAGAGTACGTGACTGGAGGAGAATTGTTTGACAGGATTGCAACCAAGGGCAAACTTCCAGAAGCTGAAGGTAGGAAGCTTTTCCAACAGTTGATCGACGGTGTTAGCTACTGTCACAATAAAGGGGTCTTCCACAGGGATCTCAAGCTTGAGAATGTACTAGTGGATGCCAAAGGGAACATAAAGATATCTGATTTTGGCCTTAGTGCTTTACCCCAGCATTTCAGAGCAGATGGTCTGCTGCATACCACCTGTGGAAGTCCCAATTATGTTGCACCTGAGATTCTTTCTAATAAAGGATATCATGGTGCAACATCAGACATATGGTCATGTGGGGTTATATTGTATGTTATTTTAACAGGATATCTTCCTTTTGATGATAGGAACCTTGCAGTTCTCTACCAAAGGATTCTTAAAGGAGATGTTCAAATACCAAAATGGCTATCTTCTGGAGCCAAAAACATGATAAAGAGGATTCTTGATCCCAACCCTGTTACTCGGATAACAATGGCTGGCATCAGAGAAGATGAATGGTTCAAGCAGGACTATATTTCGGCAAATCCAGAGGATGAGGAAGAGAATGTATATATTGACGATGAAGCTTTTTCCATCCATGAATTGCCACATGAAGCAGAAAATAAGAGTCCAAGATCAACGACTCAAATCAATGCATTTCAATTGATAGGGATGTCTTCATGCCTAGACCTCTCTGGCTTCTTTGAAAAAGAGGATGTCTCAGAGAGGAAGATAAGATTTACATCCAACCATTCCGCAAAAGACCTGATGGAGAGGCTTGAGGACATTGTGACAGAAATGGGATTCACAGTCCAAAAGAAAAATGGAAAGTTGACAGTGATACAAGAGAACAAGGCACATAGAAGTTTAGGCAGCCTCACAGTTGCAGCAGAGGTTTTTGAAATCAGCCCATCCTTGTATGTAGTAGAGTTGAGAAAATCTTATGGAGATTCTTCTATATATAGACAGTTGTGCAAGAAATTGTCAGATGACTTGGGCGTTCCTCCAACTCCAAATGAAGAAGTAGTGAGCTCGTAA 1353 0.4265 MVIVKLGKKNEKGKQGQGMRLGKYELGRTLGEGNFGKVKLARNTDSGQPFAVKIIEKSKITDLNIADQIKREIATLKLLKHPNVVRLYEVLASKTKIYMVLEYVTGGELFDRIATKGKLPEAEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDAKGNIKISDFGLSALPQHFRADGLLHTTCGSPNYVAPEILSNKGYHGATSDIWSCGVILYVILTGYLPFDDRNLAVLYQRILKGDVQIPKWLSSGAKNMIKRILDPNPVTRITMAGIREDEWFKQDYISANPEDEEENVYIDDEAFSIHELPHEAENKSPRSTTQINAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNHSAKDLMERLEDIVTEMGFTVQKKNGKLTVIQENKAHRSLGSLTVAAEVFEISPSLYVVELRKSYGDSSIYRQLCKKLSDDLGVPPTPNEEVVSS 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2479 450 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Dere03g2479 450 Gene3D Transferase(Phosphotransferase) domain 1 104 304 - -
Dere03g2479 450 Pfam NAF domain 320 378 IPR004041 GO:0007165
Dere03g2479 450 FunFam Non-specific serine/threonine protein kinase 15 103 - -
Dere03g2479 450 Gene3D Phosphorylase Kinase; domain 1 7 103 - -
Dere03g2479 450 Pfam Protein kinase domain 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2479 450 ProSiteProfiles NAF domain profile. 317 341 IPR018451 GO:0007165
Dere03g2479 450 ProSiteProfiles Protein kinase domain profile. 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2479 450 SMART serkin_6 24 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2479 450 SUPERFAMILY Protein kinase-like (PK-like) 21 315 IPR011009 -
Dere03g2479 450 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 14 422 - -
Dere03g2479 450 FunFam Non-specific serine/threonine protein kinase 17 319 - -
Dere03g2479 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 143 155 IPR008271 GO:0004672|GO:0006468
Dere03g2479 450 Gene3D Kinase associated domain 1, KA1 317 439 - -
Dere03g2479 450 FunFam Non-specific serine/threonine protein kinase 319 440 - -
Dere03g2479 450 CDD CIPK_C 323 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2479 Dere-ChrDere03 38848550 38853304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2479 87 449 CBL-interacting serine-threonine protein kinases AT3G17510 71.154 0.0 512
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Dere03g2479 Pkinase 1.8e-73 CL0016