Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2470 ATGGAAGGAAAATTTTCATTAAAAGAATTGCTGGATGTTGAGGGAAGGCCATCACACACATATGATGATAGCATCGATGCACCACACAGGAATGATGAAGAATTCTCCATTAACAATACTATGGGATTCAATTTTCTCAGTTTGAGCCTAAATAACTCAGAAAAAGATCGCCAGAATTATGATCATCCTTCAACCCAAGCAGGCTTGCTGAGAATTAAGCTCGAGGAAGCAAAGAAAGAGAATCAGAAATTGAAAGCTATGCTAAACCAGACTACTGAACACTACACTGCTCTTCAGAATTACCTTCTTTTGACGATGCAGAAGCAGAAGGAGCAGCAGCAACAATCACCACCTCTACATTATCATAATCTGCTGCAGAATAGAGCAGATGTGATGGTGATGGAGAAGCCAGCGTTGCCACTTGAAGGTGATCATCGTATGGATAACCAAGTAACGCTGGAAAGAGCCAAAAGCATAGCAGATCTAGCATCTGAGGCATTTCGCAGGAAGGCTAGAGTGTCCATAAGGGCACATTCAGATTTCTCTTTGATGGGTGATGGGTGTCAATGGAGAAAGTATGGACAAAAGAGAGCAAAGGGTAACCCTTGTCCTCGAGCTTACTATCGTTGCAGCATGGGAACTGCATGTCCAGTTCGTAAGCAGGTGCAAAGGTGTGCTAAGGATGACACTGTACTCATTACAACCTATGAAGGGAACCACAATCACCCACTTCCACCAGCAGCCAGACCCATGGCAAGCACAACATCAGCAGCACTGAACATGTTCCTTTCAGGCTCTACCACTAGTCCTGCACATAATAGCAGCACAAAACTAGATTTAAGCCTCTTCCCTTCATTACCTGCTTCTGTCTCCAATGGCTTGGTTACCTTCTCTCCTTCTGCATCATGTCCTACAGTTACACTAGACTTGACTCTTCCCTCTAATAAAAACTCTTTGCCCTTCCAGAGGGCTACTTCACTGAACCACTGCCAACCATTCCCCTTCTCACTGCACGGCTCTGTTCAACAGACTAAGAGGCTGAACTTGTACACGAAGCCTCCAACGGCAATGCCCCCGGAGAAAAAACTTTGTTTGGTGGATTTAGTCGGTGCAGCTATAGCCAAAGAGCCTTCTGTCAAAGCAGCATTAGTCGCAGCCATATCCGCATTCAGTGGAGCCACTCAGAATCATAATAACCACAATGAACTAAGCAAGAGTGGGCGTGATCCTTCTTCTAAGATACCTTCACTGCTGCACCAGTCCTGCAACAGTGGATTGATTTAG 1284 0.4502 MEGKFSLKELLDVEGRPSHTYDDSIDAPHRNDEEFSINNTMGFNFLSLSLNNSEKDRQNYDHPSTQAGLLRIKLEEAKKENQKLKAMLNQTTEHYTALQNYLLLTMQKQKEQQQQSPPLHYHNLLQNRADVMVMEKPALPLEGDHRMDNQVTLERAKSIADLASEAFRRKARVSIRAHSDFSLMGDGCQWRKYGQKRAKGNPCPRAYYRCSMGTACPVRKQVQRCAKDDTVLITTYEGNHNHPLPPAARPMASTTSAALNMFLSGSTTSPAHNSSTKLDLSLFPSLPASVSNGLVTFSPSASCPTVTLDLTLPSNKNSLPFQRATSLNHCQPFPFSLHGSVQQTKRLNLYTKPPTAMPPEKKLCLVDLVGAAIAKEPSVKAALVAAISAFSGATQNHNNHNELSKSGRDPSSKIPSLLHQSCNSGLI 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2470 427 FunFam probable WRKY transcription factor 31 169 246 - -
Dere03g2470 427 MobiDBLite consensus disorder prediction 395 427 - -
Dere03g2470 427 Pfam WRKY DNA -binding domain 186 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g2470 427 Gene3D WRKY domain 169 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g2470 427 SMART WRKY_cls 184 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g2470 427 SUPERFAMILY WRKY DNA-binding domain 177 245 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dere03g2470 427 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 401 IPR044810 GO:0003700
Dere03g2470 427 ProSiteProfiles WRKY domain profile. 179 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dere03g2470 427 MobiDBLite consensus disorder prediction 408 427 - -
Dere03g2470 427 Coils Coil 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2470 Dere-ChrDere03 38719156 38722212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2470 156 311 WRKY Transcription Factor Family AT4G04450 63.462 1.73e-60 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dere03g2470 WRKY 7.8e-23 CL0274