Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2463 ATGAGGAAAGCAGAGCAAATCGATGCCCACCATACCCAGTCGTCATCTTCTTCGTCTTCTTCAATTGATAGCAGCAATTACCCTTGTGGGAGTGGGAAACCAGCAGCCTCTTCTTCTTATTCTTCCTCATCCTCCTCTTTGTGCCTCTCAAGTGTTTGTAGAAATACCAGCGGCTCAAGAACTGATCTGATCACCGACCTGAGACTTGGCCTTAGCATTTCTCCTTCTCAGCCTGACTTTTCCAATTCAACCCTGAGGTCAAGGGATCCAACTTCAGATTGGCCACCAATTAAGTCCATATTGAGGAGCACCCTTGTTGAGAAACAAAACCAGCAAAGGCCTTCTTTGTTTGTGAAAGTGTACATGGAAGGCATTCCCATCGGCAGAAAATTGAACCTGCTGGCACACCATAATTATGATGAACTTATCAGAGCTCTTGGCCATATGTTCAGGACCACCATTCTCTGCCCAAATTCTCAACCAGTTCATTCTGGAAATTTTCACGTGTTAACTTACGAGGATCAAGAAGGTGACTGGATGATGGTTGGAGACGTGCCATGGGAAATGTTCTTGACCAGTGTGAAAAGGCTGAAGATCACCAGAGCAGACAGATGTTAG 618 0.4547 MRKAEQIDAHHTQSSSSSSSSIDSSNYPCGSGKPAASSSYSSSSSSLCLSSVCRNTSGSRTDLITDLRLGLSISPSQPDFSNSTLRSRDPTSDWPPIKSILRSTLVEKQNQQRPSLFVKVYMEGIPIGRKLNLLAHHNYDELIRALGHMFRTTILCPNSQPVHSGNFHVLTYEDQEGDWMMVGDVPWEMFLTSVKRLKITRADRC 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2463 205 MobiDBLite consensus disorder prediction 10 43 - -
Dere03g2463 205 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 64 203 IPR003311 GO:0005634|GO:0006355
Dere03g2463 205 MobiDBLite consensus disorder prediction 1 43 - -
Dere03g2463 205 Gene3D - 109 205 - -
Dere03g2463 205 Pfam AUX/IAA family 86 201 IPR033389 -
Dere03g2463 205 SUPERFAMILY CAD & PB1 domains 111 199 - -
Dere03g2463 205 ProSiteProfiles PB1 domain profile. 115 204 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2463 Dere-ChrDere03 38659252 38660604 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2463 79 205 B3 DNA Binding Superfamily AT2G46530 32.031 7.80e-12 61.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Dere03g2463 AUX_IAA 1e-32 CL0072