Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2431 ATGGGAAGAGAAAGAGAGGCACCGAAGCAGCAACAGCAGCCGGTGGCGTACACAGTGGAGCAGCTCGTCGCCGTTAATCGTTATAATCCTGACATCCTTCCCGATCTCGAAAACTATGTCAATGAGCAGGTTTCATCACAAACGTACAGCTTGGATGCAAATCTATGCCTCCTGCGCCTCTATCAGTTTGAACCAGAGAGAATGAGTTCCCAGATTGTTGCCCGCATATTAGTTAAGGCCCTCATGGCAATACCAGCTCCAGATTTCAGCCTGTGTCTCTTTCTGATTCCAGAACGTGTGCAAATGGAGGAGCAGTTCAAGACACTGATCGTTTTATCTCACTATTTGGAGACAGGAAGATTTCGCCAGTTCTGGGATGAAGCAGCAAAGAGTCGTCATATAGTTGAAGCTGTACCAGGATTTGAGCAAGCAATCCAAGGTTATGCTATTCATGTCCTTTCCTTAACTTACCAAAAAGTACCTAGATCTGTGCTTGCTGAGGCTATCAACATAGAAGGTTTGTCGTTAGACAAATTCCTCGAACACCATGTAGCCAACAGTGGTTGGGTCATCGAGAAAAACCACGGCAAGGGTCAACTCATCGTCCTACCAAGAAACGAATACAATGACCCTGCATTGAAGAAAAACACTGCAGATAGTGTGCCATTGGAGCACATCACACGCATTTTTCCTATTCTGGGCTGA 705 0.4596 MGREREAPKQQQQPVAYTVEQLVAVNRYNPDILPDLENYVNEQVSSQTYSLDANLCLLRLYQFEPERMSSQIVARILVKALMAIPAPDFSLCLFLIPERVQMEEQFKTLIVLSHYLETGRFRQFWDEAAKSRHIVEAVPGFEQAIQGYAIHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHHVANSGWVIEKNHGKGQLIVLPRNEYNDPALKKNTADSVPLEHITRIFPILG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2431 234 FunFam Eukaryotic translation initiation factor 3 subunit K 10 127 - -
Dere03g2431 234 Pfam CSN8/PSMD8/EIF3K family 69 194 IPR033464 -
Dere03g2431 234 Gene3D - 130 232 IPR036388 -
Dere03g2431 234 SUPERFAMILY "Winged helix" DNA-binding domain 139 231 IPR036390 -
Dere03g2431 234 FunFam Eukaryotic translation initiation factor 3 subunit K 130 233 - -
Dere03g2431 234 Hamap Eukaryotic translation initiation factor 3 subunit K [EIF3K]. 10 234 IPR009374 GO:0003743|GO:0005737|GO:0005852
Dere03g2431 234 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11 8 231 IPR009374 GO:0003743|GO:0005737|GO:0005852
Dere03g2431 234 ProSiteProfiles PCI domain profile. 49 207 IPR000717 -
Dere03g2431 234 SUPERFAMILY ARM repeat 12 136 IPR016024 -
Dere03g2431 234 Gene3D ARM repeat; domain 1 10 127 IPR016020 GO:0003743|GO:0005852|GO:0006446|GO:0043022
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2431 Dere-ChrDere03 38279371 38282158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2431 1 234 Eukaryotic Initiation Factors Gene Family AT4G33250 75.641 4.72e-131 367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g2431 03 38279371 38282158 Dere03g2431 03 38279371 38282158 ECH