Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2422 ATGCCTCTCACTCTCACTTCTCTTTTCCCCTTCCTCCTCCTCCCCCTCCTCTCCTACTCCGCCGCCGCATCGCCACCGCCCTCCGATCTGGTGCGTTCCTCCTGCATCCACGCCAGGTACCCCCATCTTTGCCTCCGAACTCTCTCCGCCTACGCCGGACCTGCCAATACCCCCAAGGACCTCGCTCAGGCCGCCCTCTCCGTCAGCCTCGATCACGCTCGCCATCTCTCCCGTTACCTCAAGATTCACCCACCCTCCCTCGCCGAGAGTACCGCCGGCGGCAACGGGCGCCGTCATCGGCAGCAATCGGCGCTGCGCGACTGCGCGGAGCAGTTAGCGGACTCCGTGGATAATCTCAGCAGGAGCCTGAAGGAGTTGCAGCACCTGCGAACGTCGACGTTTCGGTGGCAGATGAGCAACGCCCAGACCTGGGTGAGCGCCGCCATGACGGACGAAGACACGTGTCTCGACGGGTTGAGGCTCGGCGACGACGGCGATGACGGCGCCGTCGGGAAGATGAAGCGGAAGATCAATCGGTTGGCGAGGGTCACCAGCAACGCGCTCTACATGATCAATCGCCTCTGCGAGAGCCGTAGGATGGTCGCGCCATATCACTCCAAACAATCTGAACCGTCCGTTTAA 642 0.6277 MPLTLTSLFPFLLLPLLSYSAAASPPPSDLVRSSCIHARYPHLCLRTLSAYAGPANTPKDLAQAALSVSLDHARHLSRYLKIHPPSLAESTAGGNGRRHRQQSALRDCAEQLADSVDNLSRSLKELQHLRTSTFRWQMSNAQTWVSAAMTDEDTCLDGLRLGDDGDDGAVGKMKRKINRLARVTSNALYMINRLCESRRMVAPYHSKQSEPSV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2422 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 28 194 IPR035513 -
Dere03g2422 213 Coils Coil 109 129 - -
Dere03g2422 213 CDD PMEI-like_3 33 194 - -
Dere03g2422 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 189 - -
Dere03g2422 213 Pfam Plant invertase/pectin methylesterase inhibitor 29 189 IPR006501 GO:0004857
Dere03g2422 213 NCBIfam pectinesterase inhibitor domain 4 194 IPR006501 GO:0004857
Dere03g2422 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 27 195 IPR035513 -
Dere03g2422 213 SMART PMEI_2 26 190 IPR006501 GO:0004857
Dere03g2422 213 FunFam Pectinesterase inhibitor 3 27 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2422 Dere-ChrDere03 38102974 38103615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2422 24 207 Carbohydrate Esterase AT3G14310 27.807 6.44e-15 70.9