Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2418 ATGGAACTCAAGCTCACAGCTCGGCAATTGGTTCTACTTTTGGTTGCTTTACTTGCTTTTCATGCACGCGCCTCTAATGTGACCGTAAATGAGACTGCTTGTGGTTGCTTCAATGGTTCTCAGAATAGAGACAGTGGAGAACCATGCCCAACTGGTTGGGTTGCTGGTCCCAATAAAGCCAAGTGTTTTTGCCATGTTTGGAAGCCACAATCTTGGAATGACTCAGAAACCTGTTGTAGTAAATGTGGTGGGCATTTAGCTTCTTCGAAATCTCTTCCAGAACTACACTTTGCTCAGAGTCTATGTGGTGACAGTTGCTGGGTCGGAGGAAGAAGAATTAACTCTACCACAGGTTATGCGTGGGTGTGGTCTGACAATTCTCCATGGAATCAGTCCATGTTTCCTTTGGTGCCTGATCCAACTAATTGTAATGGATTATCCTGCAACAAGAAAAATGCAGTCAATTTATGTACAATAATGACTAATCATTCAAATTCTCTCACGACTGATAGATGTGAAAAACCTCATGCTTCTGTGTGTGTTCTTGATATTGATAAAAAATGTTACCACATGCGCTGCCACAGGGAATATCTTATCATCCTTGCAGGGGTGAGTGCATTGATCCTTTGCACAACATTAGCTGTTGTGGTATGGCTTCTTGCACATAAGCGGAGCAAGAAGAGAAAACGGTCTAAAAAAGTATCTAATCCAGCTGCTTCTCAGTTAGTTCCTCCATCATGGAAAGTCTTTACCAAAGAGGAATTAAGGTCAATTACAAAGAACTTCAGTGAAGGTAACCGCCTTGTTGGGGATACCAAGACTGGAGGTACATACAGTGCAGTCCTACCTGATGGTTCAAAGGTTGCAGTCAAGAGATTAAAAAAGTCGACTTTTCAGAGGAAAAAGGAGTTCTATTCTGAAATTGGTAGGGTTGCTAGGCTTCGGCATCCAAATTTGGTGGCTGTGAAGGGATGCTGCTATGATCATGGTGACCGCTACATTGTTTATGAGTTTGTAGTTAACAGGCCTTTAGATAAATGGTTGCATCATATACCAAGGGGAGGTCGCAGCTTAGATTGGGCTATGAGGATGAAAATTGCCACAACGCTTGCTCAAGGAATTGCCTTTCTACATGACAAGGTCAAGCCACATGTTGTGCATCGGGATATACGGGCCAGTAATGTACTGCTGGATGAGGAGTTTGGAGCTCACCTTATGGGTGTTGGTCTGTCCAAGTTTGTGCCATATGAAGTGATGCATGAGAGGACTGTGATGGCAGGTGGAACTTATGGATATCTTGCTCCAGAATTTGTGTATAGAAATGAGCTCACAACGAAGAGTGACGTTTACAGTTTCGGTGTCTTATTACTTGAAATAGTGACTGGCCGTAGACCTGCCCAGGCAGTTGATTCAGTGGGTTGGCAGAGCATATTTGAATGGGCAACGCCGCTAGTGCAAGCACATCGGTATCCAGAACTCTTGGATCCTCATATATCTTCCTCATCATCTTCTAGTATCCCAGAGGCTAGTTCCATTCAGAAGGTGGTTGACCTCGTCTATTCTTGCACACAGCATGTCCCATCTATGCGCCCTAGAATGTCTCATGTTGTTCATCAGCTGCAACAATTTGCTCAGCCACCAGCGAAGTGA 1650 0.44 MELKLTARQLVLLLVALLAFHARASNVTVNETACGCFNGSQNRDSGEPCPTGWVAGPNKAKCFCHVWKPQSWNDSETCCSKCGGHLASSKSLPELHFAQSLCGDSCWVGGRRINSTTGYAWVWSDNSPWNQSMFPLVPDPTNCNGLSCNKKNAVNLCTIMTNHSNSLTTDRCEKPHASVCVLDIDKKCYHMRCHREYLIILAGVSALILCTTLAVVVWLLAHKRSKKRKRSKKVSNPAASQLVPPSWKVFTKEELRSITKNFSEGNRLVGDTKTGGTYSAVLPDGSKVAVKRLKKSTFQRKKEFYSEIGRVARLRHPNLVAVKGCCYDHGDRYIVYEFVVNRPLDKWLHHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPHVVHRDIRASNVLLDEEFGAHLMGVGLSKFVPYEVMHERTVMAGGTYGYLAPEFVYRNELTTKSDVYSFGVLLLEIVTGRRPAQAVDSVGWQSIFEWATPLVQAHRYPELLDPHISSSSSSSIPEASSIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQFAQPPAK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2418 549 ProSiteProfiles Protein kinase domain profile. 263 544 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2418 549 FunFam C-type lectin receptor-like tyrosine-protein kinase 240 338 - -
Dere03g2418 549 SMART tyrkin_6 272 540 IPR020635 GO:0004713|GO:0006468
Dere03g2418 549 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 170 542 - -
Dere03g2418 549 Pfam Protein tyrosine and serine/threonine kinase 284 540 IPR001245 GO:0004672|GO:0006468
Dere03g2418 549 ProSiteProfiles C-type lectin domain profile. 58 181 IPR001304 -
Dere03g2418 549 Gene3D Transferase(Phosphotransferase) domain 1 340 545 - -
Dere03g2418 549 ProSitePatterns Tyrosine protein kinases specific active-site signature. 385 397 IPR008266 GO:0004672|GO:0006468
Dere03g2418 549 SUPERFAMILY Protein kinase-like (PK-like) 236 540 IPR011009 -
Dere03g2418 549 Gene3D - 35 183 IPR016186 -
Dere03g2418 549 Pfam Lectin C-type domain 69 181 IPR001304 -
Dere03g2418 549 SMART CLECT_2 49 181 IPR001304 -
Dere03g2418 549 FunFam C-type lectin receptor-like tyrosine-protein kinase At1g52310 339 549 - -
Dere03g2418 549 SUPERFAMILY C-type lectin-like 34 183 IPR016187 -
Dere03g2418 549 CDD CLECT 61 180 - -
Dere03g2418 549 Gene3D Phosphorylase Kinase; domain 1 221 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2418 Dere-ChrDere03 38067028 38071149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2418 79 546 Receptor kinase-like Gene Family AT1G52310 70.168 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Dere03g2418 PK_Tyr_Ser-Thr 8e-39 CL0016