Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2410 ATGGTGAAGCAGAGCTCCGAAAAGCCGGCCGAACGAAGCGATTCCAAGTACAGAGGGGTCCGGAAGAGGAAGTGGGGCAAGTGGGTCGCGGAAATTAGACTACCTAACAGCAGGGAAAGGATCTGGTTGGGCTCCTACGACTCCGCCGTGAAGGCGGCGCGTGCTTTCGATGCCGCCACGTTTTGCTTACGTGGCCCCTCCGGCAACTTTAATTTCCCGGATAACCCACCCAACATCGCCGGCGGCAGGTCCTTGACCCCCTCTCAGGTTCAAGTTGCCGCGGCCGGTTTTGCCAACTCGGAGCCCCGAAGGGGTGATTCGGGTATACCCATGACGAGTGAGGAGTCTCCATCTCCTTCGGCTTCCGAAGTGACGGTGTTGCCCATGGAATCTCCGTCACCTTCAGTTTCGGAGGTGACTGTGCAAACGGAGAGCGAGGTAAATATAAACGAGTCGGTGCCGGATCTGTTCAAGGCAATCGAGTCGGGCAATTATGCACCCGAATATGGGATATTTCCGGGTTTTGATGATTTAACCAGTGGGTTCTACATACCAGAAATACCCAATGTGGATTATGGAGAAGAAAACATGGAGGGATTGATAATTGACGACTCATTCTTGTGGAATTTTTAA 633 0.5308 MVKQSSEKPAERSDSKYRGVRKRKWGKWVAEIRLPNSRERIWLGSYDSAVKAARAFDAATFCLRGPSGNFNFPDNPPNIAGGRSLTPSQVQVAAAGFANSEPRRGDSGIPMTSEESPSPSASEVTVLPMESPSPSVSEVTVQTESEVNINESVPDLFKAIESGNYAPEYGIFPGFDDLTSGFYIPEIPNVDYGEENMEGLIIDDSFLWNF 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2410 210 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Dere03g2410 210 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Dere03g2410 210 MobiDBLite consensus disorder prediction 1 22 - -
Dere03g2410 210 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Dere03g2410 210 MobiDBLite consensus disorder prediction 98 124 - -
Dere03g2410 210 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Dere03g2410 210 Gene3D AP2/ERF domain 15 74 IPR036955 GO:0003700|GO:0006355
Dere03g2410 210 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 142 - -
Dere03g2410 210 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Dere03g2410 210 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Dere03g2410 210 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Dere03g2410 210 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2410 Dere-ChrDere03 37938722 37939354 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2410 15 210 AP2-EREBP Transcription Factor Family AT1G19210 47.264 1.67e-52 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere03g2410 AP2 2.4e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere03g2410 03 37938722 37939354 Dere03g2410 03 37938722 37939354 ECH