Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2404 ATGGCCGCTGTTCGACAATACCTTTTCTTCCCTCTCTTCTTCCTCACACTTTTTTCTCTCTCTTCTCCTTCTTTCTCTCTTTCAGAAGTCGATGCCCTCCTCAAGCTCAAGCAATCCTTCAACAATTCTGGTGCTCTATCTTCTTGGGTCCCCAATTCCTCCCCTTGCTCTGACAGATGGGCCGGTATCATGTGCGAAAACAACGTCATCACGGGTCTTCACGTATCAGGTATGGGGCTCTCCGGGAAAATCGACGTTGAAGCTATGATGGAGATTAAAAGCCTGCGAACCGTTAGCTTCATGGACAATTCCTTCTCGGGCCCAATACCAGAGTTCAACAAAATCGGTGTTCTCAAGGCATTGTACTTATCCAGAAACCAGTTTTCTGGGGAGATTCCTGCGGATTTCTTTTCATATTTAGACTCGTTGAAGAAAGTCTGGCTTAATGGGAACAAATTCTCAGGACCCATCCCCGATTCGCTTTCACAACTAGAGATGCTCGTGGAGATTCACCTCGAGAACAACGAATTCTCAGGAACCATCCCACCTCTAACGCAGGACATCACATCTCTGGACATGTCGAACAACAAATTGCAAGGACCAATCCCGGAGAGCATAGCAAGATTTGGAGTTGATTCGTTCAAGGGAAACGATGGACTCTGTGGGAAACCTCTAGAAAAGGCATGCGACCTTCCGAAGGACGAGCAGAGCAATCCCAGCTACGTCATGAACGTCATTCTATTCCTTGCTGTCGGGATCATCGCAATCTTGCTGTTGGTAGTGATGAGGTCCTCAAGGCGTCGTCGAGACGACGACTTCAGTGTTCTGAGTAGAGAAAACGTGGACGAGGAGGCACGAATGCACATGACGAGCTCGAACCGAAGCAGAGCATCGGAAACGGAATCGGAATCGAGCAAGAAGGGTACGGGTACGAAGAGGGGTCCGAAGAACGGAAATGGAGATCTGGTAGTGGTGAATGATGAGAAGGGGTTGTTCGGGTTGCCGGATTTGATGAAGGCGGCGGCGGAAGTTCTGGGAAATGGGGCGTTGGGATCGGCATATAAAGCGGCTATGGCGTCTGGGTTGTGCGTGGTGGTGAAGAGGATAAGGGACATTAATCAGATAGGTAGAGATTATTTCGATGCTGAGATGAGAGGGTTTGGCAGAATCAGGCACCCCAACATTCTGACGCCTTTGGCTTACCATTTTCGTAAAGAGGAGAAGCTACTTGTGTCGGAATACATGCCCAAGGGCAGCTTGTTGTATGTCTTGCATGGGGATAGGGGAAAAAGTCACGCTGATCTGACCTGGCCTACACGTTTGAAGATTGTCCAAGGAATAGCACAAGGGCTTCGCTTCCTTCATTCTCAGTTTTCTTCCTACGACCTTCCTCATGGGAACCTTAAGTCCAGCAATGTCCTCCTAAATGAAAATTACGAGCCACTGCTCTCTGACTATGCCTTCCATCCTCTTCTCAACCCCAATGCTGTCCAGTCATTGTTCGCCTTCAAATCCCCAGATTTCATACAATACCAGAAAGTTTCCCAGAAAACCGACGTCTATTGCCTCGGAATCATCATCCTCGAGATCATCACCGGGAAATTCCCTTCTCAGTATCACACCAATGGCAAGGGCGGCACTGATGTTGTGCAATGGGTCCTCACTGCAGTTTCTGAGGGAAGAGAAGCAGAAGTGATCGATCCCGAAATAGGAAGTAACACCGCCTCCCTCGCTCAAATGCTGCAACTTCTCCAAATTGGGGCTGCTTGCACCGAGAGTGATCCAGAACAACGACTTAACTTGAGTGAAGCCCTTAGGAGGATAGAGGAGGAACGCAATGTTGAGCAATTCATGAATGATCTTTTGAGGGTATCGGCAAAATACACAAAAAAGGTGAAAGACGGAAGATGGAGGAAGAGAAAAGAGGTAGAGAGGGAGAAAGATGGTATATGGCTTCGCAGATGA 1965 0.4835 MAAVRQYLFFPLFFLTLFSLSSPSFSLSEVDALLKLKQSFNNSGALSSWVPNSSPCSDRWAGIMCENNVITGLHVSGMGLSGKIDVEAMMEIKSLRTVSFMDNSFSGPIPEFNKIGVLKALYLSRNQFSGEIPADFFSYLDSLKKVWLNGNKFSGPIPDSLSQLEMLVEIHLENNEFSGTIPPLTQDITSLDMSNNKLQGPIPESIARFGVDSFKGNDGLCGKPLEKACDLPKDEQSNPSYVMNVILFLAVGIIAILLLVVMRSSRRRRDDDFSVLSRENVDEEARMHMTSSNRSRASETESESSKKGTGTKRGPKNGNGDLVVVNDEKGLFGLPDLMKAAAEVLGNGALGSAYKAAMASGLCVVVKRIRDINQIGRDYFDAEMRGFGRIRHPNILTPLAYHFRKEEKLLVSEYMPKGSLLYVLHGDRGKSHADLTWPTRLKIVQGIAQGLRFLHSQFSSYDLPHGNLKSSNVLLNENYEPLLSDYAFHPLLNPNAVQSLFAFKSPDFIQYQKVSQKTDVYCLGIIILEIITGKFPSQYHTNGKGGTDVVQWVLTAVSEGREAEVIDPEIGSNTASLAQMLQLLQIGAACTESDPEQRLNLSEALRRIEEERNVEQFMNDLLRVSAKYTKKVKDGRWRKRKEVEREKDGIWLRR 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2404 654 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 612 IPR046959 -
Dere03g2404 654 FunFam Nuclear pore complex protein NUP107 26 183 - -
Dere03g2404 654 Pfam Protein kinase domain 343 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2404 654 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515
Dere03g2404 654 ProSiteProfiles Protein kinase domain profile. 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2404 654 SUPERFAMILY Protein kinase-like (PK-like) 343 608 IPR011009 -
Dere03g2404 654 Gene3D Transferase(Phosphotransferase) domain 1 415 625 - -
Dere03g2404 654 Gene3D Phosphorylase Kinase; domain 1 324 414 - -
Dere03g2404 654 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Dere03g2404 654 Gene3D Ribonuclease Inhibitor 188 227 IPR032675 -
Dere03g2404 654 MobiDBLite consensus disorder prediction 284 322 - -
Dere03g2404 654 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Dere03g2404 654 SUPERFAMILY L domain-like 26 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2404 Dere-ChrDere03 37869247 37871658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2404 8 609 Receptor kinase-like Gene Family AT3G42880 51.192 0.0 632
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere03g2404 Pkinase 1.1e-26 CL0016