Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2381 ATGGAAGGCTTTTTTCCCGAGAAATTTCTGGGTGAGAATTTCAGGGATGAATCTCCTTCTCTGGAAAATCAGAGTGAGCTAGAGAGCTTTCATGTCGGATCAATTTCCCAGAACTCCAAGGATGAAGATGAACCTCCTCCTCCTGCTTATCAGAGTGATACTCTTCTATATTGTGACATTCCCAGAGTTGGATTTGGACAAGAAAGTTCTCGGATTGGGTCCGATTCAAATCAAAGTGCTTTTGCTCAATGTGGTGGTGACCTACCTGGAATCGGACTTGGCGGAGCAAGTTCCTGTTTCATCAACATGAAAGATCCTGGTCGTGGAGCTTCTCAATCTTCTGCAAATCGAAGTATTTTTGTTCAATACAGAGACCTACCCAGCATAGGATTTGGTCAAGGAAGATCAAATTCTATGAATATGAGCAGGAGAATGATTGATTTCTTGAGAAAAAGTTGGCCCGTGGAAAGAACCAACATATCAGAGTACGAAAGAGAACGAGGTTTCAGGCATATGATTAACGAGAGGATGAGGAGGCAGAGGCAGAGGCAGTGTTGCTTGGCTCTGCACTCTGTATTACCATTTGGGACCAAAAATGATATTAATTCGGTGACTCAAATGGCAGCCAAGGAGATTCAAAGGCTTCAAGCTCACAGGGATGAATTGAAGAGTCAAAATTCTGAGCTTGAAGCAAATGTTAAAGCTGTAGAAGGCAGCAAATTTGAATTCAGATTGGCTAATCCTACATCTGCAATCGATTCTATGCTTGAGATGCTTCAATTCTTGAAGGGTCTTGGAGTGAATACCAGAAGCATCACATCAAATTTCTCCCCGGAGGAGCTGTCTGCAACGTTAGAAATTGAGCCCAAGATTGGAGATGCTGAGGTAGAAAGGGCAATTCAAGGAGCACTGAGTGAAAATGAATGGAAGCACCGTTGTACTAAGTGGGAAGTTTCCAAAAGGCAAAGAACAGGAAATGAGAAGTGA 987 0.4286 MEGFFPEKFLGENFRDESPSLENQSELESFHVGSISQNSKDEDEPPPPAYQSDTLLYCDIPRVGFGQESSRIGSDSNQSAFAQCGGDLPGIGLGGASSCFINMKDPGRGASQSSANRSIFVQYRDLPSIGFGQGRSNSMNMSRRMIDFLRKSWPVERTNISEYERERGFRHMINERMRRQRQRQCCLALHSVLPFGTKNDINSVTQMAAKEIQRLQAHRDELKSQNSELEANVKAVEGSKFEFRLANPTSAIDSMLEMLQFLKGLGVNTRSITSNFSPEELSATLEIEPKIGDAEVERAIQGALSENEWKHRCTKWEVSKRQRTGNEK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2381 328 Coils Coil 205 239 - -
Dere03g2381 328 MobiDBLite consensus disorder prediction 23 41 - -
Dere03g2381 328 Gene3D - 157 242 IPR036638 GO:0046983
Dere03g2381 328 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 163 230 IPR036638 GO:0046983
Dere03g2381 328 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 306 IPR044658 -
Dere03g2381 328 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 215 IPR011598 GO:0046983
Dere03g2381 328 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2381 Dere-ChrDere03 37534466 37537610 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2381 136 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 42.593 1.21e-37 132