Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2353 ATGAATCTAATTCTCTCCTTCTTAATTCCGTATCACAAACTCTATCTCTTCTCCTCTTCCCTCTCAGAGAACTTTAGAATCAGCAAAGAAAAAGAAGCAAATCTGGCTAATCCTTGGTGGACCGGTCAGGTGGGGTTGCCGGGAGTAGAGCCGGCAGCCAACTCCCCTGGCCTCAACAAGCGCCACACGGATCTCTCCATCAACGAGAGCAGCGGCCGGAGCGGCAACCGAGAAGACGATGAAGATAGAGAAAACGGGGACGAGCCCAAGGAGGGTGCAGTCGATGTCGGAACTCGCAGGCCCAGGGGCCGGCCTCCTGGGTCCAAAAACAAACCCAAGCCACCTATCTTCGTGACCCGAGACAGCCCCAACGCCCTAAGAAGCCACGTGATGGAGGTGGCCGGAGGAGCCGATGTGGCCGAGAGTGTGGCCCAATTCGCAAGGAGGCGTCAGCGTGGCGTTTGCGTGCTCAGCGGGAGTGGCTCAGTTGCCAACGTCACTCTCCGCCAGCCAGCTGCCCCCGGGGCTGTCGTGGCTCTCCATGGCAGGTTTGAAATTCTATCCCTAACAGGCGCTTTCCTGCCAGGACCCGCCCCTCCCGGCTCGACGGGGCTTACGGTGTATCTCGCAGGAGGACAAGGGCAGGTCGTCGGAGGAAGCGTCGTCGGGTCTCTTGTCGCGGCAGGACCAGTGATGGTCATTGCTGCGACTTTTGCTAATGCGACTTACGAGAGACTACCACTTGATGACGATGAAGAGGGGGCCAGCGCTGCCGCGCAAGGAGGCGGAGGAGGGTCGCCACGGGGAATCGGGAGCAGCGGAGGCCAGTCGTTGCAGGCGGGGCTTCCGGATCCGTCATCTCTGCCTTTGTACAATCTGCCGCCGAATCTGCTGCCCAACGGAGGTGGGCAGGTGGGGCATGAAGCTTTTGCTTGGGCTCACGGGAGGCCACCTTACTGA 960 0.599 MNLILSFLIPYHKLYLFSSSLSENFRISKEKEANLANPWWTGQVGLPGVEPAANSPGLNKRHTDLSINESSGRSGNREDDEDRENGDEPKEGAVDVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDEEGASAAAQGGGGGSPRGIGSSGGQSLQAGLPDPSSLPLYNLPPNLLPNGGGQVGHEAFAWAHGRPPY 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2353 319 CDD DUF296 127 210 IPR005175 -
Dere03g2353 319 Gene3D - 126 256 - -
Dere03g2353 319 MobiDBLite consensus disorder prediction 252 287 - -
Dere03g2353 319 FunFam AT-hook motif nuclear-localized protein 126 253 - -
Dere03g2353 319 ProSiteProfiles PPC domain profile profile. 123 261 IPR005175 -
Dere03g2353 319 Pfam Plants and Prokaryotes Conserved (PCC) domain 127 239 IPR005175 -
Dere03g2353 319 MobiDBLite consensus disorder prediction 47 124 - -
Dere03g2353 319 SUPERFAMILY AF0104/ALDC/Ptd012-like 123 250 - -
Dere03g2353 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 71 315 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2353 Dere-ChrDere03 37052151 37053308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2353 35 319 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 64.360 4.80e-111 322