Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2348 ATGGCTCCTCATCCTCCTACTCCTTCCGTTCCTGAAGCTTGCAGGATTGCTGATGATAAGGATTTTCCTGGAACACCCGGTACTCTCACTGGGCTGGCTCTGAGGGTGTCTCAGTGCATATTCGCTATTGGGTCTATTGCTGCTATGGGTACCACACCCAGTTTCTTCAATTTTACGGCTTTTTGTTACTTGATAGCTTCAATGGGATTGCAAGTCATTTGGAGTTTTGTGCTTGCTTTGTTGGATGCATATGCTTTGGTGAGAAGGAAGGTCCTCCACAATCCTGTATTGGTTAGCCTCTTTGTCGTTGGAGATTGGGTAACAGCAACATTGTCTCTAGCAGCAGCTTCTGCCTCAGCTGGGATTGCAGTTCTGTACTTCAATGATGTGGGAAGTTGCAAATTTGGAGAGGAATGTCAAAAGTACCAGATTTCAGTTGCTTTAGCTTTCCTGAGCTGGATAACTATTTTAATATCATCTTTAATTATGCTTTGGCTATTGGCTGCAAGGGGTACGTACAGCAAATTCAAGCCACACCTGCTAATGATCGTAGTACAGTTGGGCTATTGCTTCTTGTATTTCATCACTGAGGTTTCCTTCAATCGTGGGATGAGTCCTTATGTGTACGTAACCTATCGAAATGTTGTGGCTGGCCTTGTAATGTTCCCTTTTGCATATTTTCTGGAGAGAAAAATAAGGCCAAAGTTGACGTTAGCTCTTTTCTTGGAAATTTTTGTGCTTTCTTTGTTGGGATTTGAGGTTATTGATCGACATAGTCCTCGCAGTGTAGCAAAAGTTCTTGGGACTTTGGTCTCTTTAGCTGGGGCGTACAGTTTGAAAAGATACCCTGCCCAATTATCACTGACTACATGGATGTGCATTGTTGGAGCAGCACAATCAGCTGTATTCACAGTGATAGTTGAACATCGCATATCAGCTTGGACCATTGGATTGAATATTGAAAAAGAAATGGAAAAAGAATGCTTGAGAAAGAAGATAATGGATTCGCAAACAATTTTATTTAGACGAAGCGCATAA 1038 0.421 MAPHPPTPSVPEACRIADDKDFPGTPGTLTGLALRVSQCIFAIGSIAAMGTTPSFFNFTAFCYLIASMGLQVIWSFVLALLDAYALVRRKVLHNPVLVSLFVVGDWVTATLSLAAASASAGIAVLYFNDVGSCKFGEECQKYQISVALAFLSWITILISSLIMLWLLAARGTYSKFKPHLLMIVVQLGYCFLYFITEVSFNRGMSPYVYVTYRNVVAGLVMFPFAYFLERKIRPKLTLALFLEIFVLSLLGFEVIDRHSPRSVAKVLGTLVSLAGAYSLKRYPAQLSLTTWMCIVGAAQSAVFTVIVEHRISAWTIGLNIEKEMEKECLRKKIMDSQTILFRRSA 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2348 345 Pfam Casparian strip membrane protein domain 26 154 IPR006702 -
Dere03g2348 345 PANTHER CASP-LIKE PROTEIN 5B3 21 169 IPR045009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere03g2348 Dere-ChrDere03 36954282 36963275 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2348 177 258 Nodulin-like Gene Family AT5G07050 48.780 1.36e-19 87.4