Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2341 ATGGATTCTTCTTTCTCCATCTTCCACTCCCCCACCTCTGATTTCTCTTCGGAATCTTCCTTCGGCTCCCCTGAATCTTTGTTCTCCTGGAATTTCGATAACAATAACCTCCCCTTCAACGAGAATGACCCCGAGGAGATGCTTCTTTATGGTCTGATTTCCAAGGCCAACAGTGATGGCCAAGAAGAGTCATTCAACAGAGTGAAGGAGGAGGAGGTGAGCTCCGAGGCCGCTGGTCCCGTCGTCGGTGCTGGCACAAGGAAGGAGAAGAGCTACAGAGGCGTGCGGCGGCGGCCATGGGGGAAATTCGCGGCGGAGATAAGGGACTCGACGAGGCACGGGATAAGGGTGTGGTTGGGGACGTTCGATAGTGCGGAAGCGGCAGCTTTAGCTTACGATCAAGCGGCGTTTTCGATGAGGGGATCGGCGGCGATACTGAATTTTCCCGTGGAGAGGGTGAGGGAGTCTCTGAAGGAGATGAACTATGGATCGGAAGATGGGTGCTCGCCGGTGGTGGCTCTGAAGAGAAAGCACTCCATGAGAAGGAAAATGAGCAGTAACAACAAGAAGAACAAGGACAGTAGAGATGTTAGGATAGAGAATGTGGTGGTGTTGGAAGATCTTGGCCCAGATTACTTGGAACAACTATTGATGTCCTCAGAGAATGCTAGGCCATGGTGA 681 0.5228 MDSSFSIFHSPTSDFSSESSFGSPESLFSWNFDNNNLPFNENDPEEMLLYGLISKANSDGQEESFNRVKEEEVSSEAAGPVVGAGTRKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSAEAAALAYDQAAFSMRGSAAILNFPVERVRESLKEMNYGSEDGCSPVVALKRKHSMRRKMSSNNKKNKDSRDVRIENVVVLEDLGPDYLEQLLMSSENARPW 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2341 226 PANTHER DNA-BINDING DOMAIN 62 218 IPR044808 GO:0003700|GO:0009873
Dere03g2341 226 Pfam AP2 domain 91 141 IPR001471 GO:0003700|GO:0006355
Dere03g2341 226 PRINTS Ethylene responsive element binding protein signature 92 103 IPR001471 GO:0003700|GO:0006355
Dere03g2341 226 PRINTS Ethylene responsive element binding protein signature 115 131 IPR001471 GO:0003700|GO:0006355
Dere03g2341 226 ProSiteProfiles AP2/ERF domain profile. 91 149 IPR001471 GO:0003700|GO:0006355
Dere03g2341 226 SMART rav1_2 91 155 IPR001471 GO:0003700|GO:0006355
Dere03g2341 226 Gene3D AP2/ERF domain 90 151 IPR036955 GO:0003700|GO:0006355
Dere03g2341 226 FunFam Ethylene-responsive transcription factor 2 90 151 - -
Dere03g2341 226 MobiDBLite consensus disorder prediction 61 90 - -
Dere03g2341 226 SUPERFAMILY DNA-binding domain 91 151 IPR016177 GO:0003677
Dere03g2341 226 CDD AP2 90 150 IPR001471 GO:0003700|GO:0006355
Dere03g2341 226 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2341 Dere-ChrDere03 36859472 36860152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2341 7 226 AP2-EREBP Transcription Factor Family AT3G23240 62.115 1.19e-83 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere03g2341 AP2 8.2e-15 CL0081