Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2322 ATGAGTGAGGAACTGGAACGAGACTACGTCGTACTAACGGAGCTGGACCGAGGGCGATTCGGCACGGTCTACAAGTGCTCTTCCCGGAGCAACGCCGGCGAGTTGTTCGCCCTGAAAACCATCGACAAACAGGTGGTGGGGGCCGGCGACTCGCTGGACGCCCAATGCCTCTTCAACGAGCCCAAGATCGTGCAGCTCCTCTCCCCCCACCCCAACATCGTGACCCTCCACAAGGTCTTCGAGGACGACACCCACCTCCACATGCTCTTCGAACTCTGCGACCACGCCGATCTCCACGACCGGATCTTCCGGTCCTTTCCCCAAGGCCCTGTAATCATACCTGAACCCGACGCCGTCCGTATCATGCGTCAGCTAATGCAAGCTGTTTCCCACTGCCACCGCCTCGGCGTGGCTCACCGGGACATCAAGCCCGGGAATATACTGTTTGCGGGCGAGCATGGGTGGCTCAAGCTAGCCGACTTCGGGTCAGCTGAGATTTTCAAGGAGGGGGAGCCGATGAGTGGGGTGGTGGGGACCCCGTACTACGTGGCGCCGGAGGTGGTGGCCGGAAGGGAGTACAATGAGAAGGTGGACGTGTGGAGCGCCGGTGTGATTTTGTACATAATGTTATCAGGGAGACCGCCGTTCAACGGGGAAACCGAGGTGGAGATTTTTGAGGCTGTGCTTAGAGCTAACTTGAGGTTTCCTAGCCGCTATTTTCACTCGGTGTCGCCGGAGGCCAAGGACCTGCTCAGAAGAATGTTCTGTAAAGACGTTTCCAGAAGGTTATCGGCTGAGGAAATTCTAAGACACCCATGGTTCACCGTTGCAGACACCATACCAAGAAAAAAGGCAACTAAAATTGTCAATGATTATATAACTGATCCCAACTCAACGGTGGATACAAGGAGCGAAAAGAATAAGCAGAAAAAAGAGGAAAGTTATAATTTCTTTTTCATGTATTTTAAACTTTTTGACATTTTGGTTCCAACATGA 996 0.5341 MSEELERDYVVLTELDRGRFGTVYKCSSRSNAGELFALKTIDKQVVGAGDSLDAQCLFNEPKIVQLLSPHPNIVTLHKVFEDDTHLHMLFELCDHADLHDRIFRSFPQGPVIIPEPDAVRIMRQLMQAVSHCHRLGVAHRDIKPGNILFAGEHGWLKLADFGSAEIFKEGEPMSGVVGTPYYVAPEVVAGREYNEKVDVWSAGVILYIMLSGRPPFNGETEVEIFEAVLRANLRFPSRYFHSVSPEAKDLLRRMFCKDVSRRLSAEEILRHPWFTVADTIPRKKATKIVNDYITDPNSTVDTRSEKNKQKKEESYNFFFMYFKLFDILVPT 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2322 331 CDD STKc_CAMK 8 273 - -
Dere03g2322 331 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 281 - -
Dere03g2322 331 Gene3D Phosphorylase Kinase; domain 1 11 99 - -
Dere03g2322 331 Pfam Protein kinase domain 9 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2322 331 ProSiteProfiles Protein kinase domain profile. 9 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2322 331 Gene3D Transferase(Phosphotransferase) domain 1 100 319 - -
Dere03g2322 331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 137 149 IPR008271 GO:0004672|GO:0006468
Dere03g2322 331 FunFam Maternal embryonic leucine zipper kinase 2 327 - -
Dere03g2322 331 SMART serkin_6 9 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2322 331 SUPERFAMILY Protein kinase-like (PK-like) 6 283 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2322 Dere-ChrDere03 36569677 36576040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2322 3 274 EF-hand Containing Proteins AT1G50700 42.545 2.29e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere03g2322 Pkinase 2.1e-70 CL0016