Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2296 ATGGCAAACAATAGGTGGAACTCAAGGAACCCTGATTCTCGCAACACTGCACAAATTGCTTGCAAATTGTGTAGTCATGTTTTCTCAAACAAGGAAGCCCTTATAGCTCATATTCATTCTCATTTGGCTTATGAAGAGATTGCCCTGAGAAGCTTCCATCAAACCTACCTAAACACTTCACAAAGAGAAACATCTCGCAATCACCAATTTGTACCCAATTCTCTAAGGGCTAATACACTTTCAGTGCAAGAAACCAATGGAAACATTTCCGTTACATGGGCTGCTAGGGCCCCACCTCAACCTGAAGTGGTGCTGCCACTGAGAAAAAACCCTAATTTTCTCAGTGCTTTTAACCTGCCGTATGCTTCACCCCAACCACCATCGCTAGGGCTTTCATCATCAAGGAATACTAATAGAGGTGCTACAGTTCAACAATCCCAACGAAGAAATTTGGAAGAGATGTCTACAATTGAAGCCACTAGGCCATTTATTGATTTGTTGGAGAGACCTATCAAGAAGATCAAGTTCATTGATTTAGTTAACATCAACGATGATGAATCTAGTTTGCGGATGTTGGATTTAACATTGAAGCTTTGA 597 0.4104 MANNRWNSRNPDSRNTAQIACKLCSHVFSNKEALIAHIHSHLAYEEIALRSFHQTYLNTSQRETSRNHQFVPNSLRANTLSVQETNGNISVTWAARAPPQPEVVLPLRKNPNFLSAFNLPYASPQPPSLGLSSSRNTNRGATVQQSQRRNLEEMSTIEATRPFIDLLERPIKKIKFIDLVNINDDESSLRMLDLTLKL 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2296 198 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Dere03g2296 198 ProSitePatterns Zinc finger C2H2 type domain signature. 21 41 IPR013087 -
Dere03g2296 198 MobiDBLite consensus disorder prediction 125 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2296 Dere-ChrDere03 36247760 36248356 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Dere03g2296 None None None