Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2226 ATGGCTGGTGTAGTGGTGTCCAAGGATGGAGATGGAGATTACACGAGTATCAGTGAAGCCATAGCAGAAGCTCCAAGATTTTGTTCTGAGAAATACAGAATCCACGTGAAAGCTGGGATCTATGAGGAACAGGTCGTAATCCCATTTGAGAAGACTAACATAGAGCTCATTGGAAAAGGGAGCCATAACACCAGAATTACTGGGAATCGAAGTTCTTCTGCTGGTACTTCCGTGGATCAAACTGCCACAGTAGCTCGTCTTCTTCGCGCAGTGATATACGGATCAGGGTTCGTGGCTGAAGAGCTCGCGATCGAGAACACAGCAGGGAGCGACGCAGGCCCAGGAGTGGCCCTTCTGAACAACGCAAGAAACACTGCCTTCTACAAATGCTCCATCAAAGGCTTCCAGGACACCCTATGGGCCGCCGCCGGCCTCCAATTCTACCGAGACTGTCAGATCTACGGCACCGTCGACTTCGTCATGGGCGACGCCGCCGCTCTCTTCCAGAACTGCAAGCTCTACGCCCGACCCAAAGACTTCGTCGCCTTCACCGCCCAGTCTCGCGCCTCCGACGCGGAACCCACCGGCTTCGTCTTCCAGTTCTGCCAGTTCACCATGTCCCCTGAGGACACAGATCGGAGATCCACCGTCATCAGAGCCACGTTGGGCCGGCCGTGGAGGGCCTATTCGAGGGTGGTCATCATGGAATCGTACATTGATTGGATCATCGATCCCACGGGGTGGGAGGTTATGTACGGTTCGGTGCGCACGGACAGGTTAAGTTACATAGAGTTTGAGAACGATGGACCTGGTGCCAAGACTGATGGGAGGGTGAAGTGGCCTGGGGTTAGGGTAGTTTATGATAAGAAGGAAGTTGAAGCTTTTACTGCTTCAAGGTTTCTTAAAGGAGATGATTGGATTCCTCGACTTCGGATTCCCTACCATGGAGGGCTCTAG 957 0.5319 MAGVVVSKDGDGDYTSISEAIAEAPRFCSEKYRIHVKAGIYEEQVVIPFEKTNIELIGKGSHNTRITGNRSSSAGTSVDQTATVARLLRAVIYGSGFVAEELAIENTAGSDAGPGVALLNNARNTAFYKCSIKGFQDTLWAAAGLQFYRDCQIYGTVDFVMGDAAALFQNCKLYARPKDFVAFTAQSRASDAEPTGFVFQFCQFTMSPEDTDRRSTVIRATLGRPWRAYSRVVIMESYIDWIIDPTGWEVMYGSVRTDRLSYIEFENDGPGAKTDGRVKWPGVRVVYDKKEVEAFTASRFLKGDDWIPRLRIPYHGGL 318
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2226 318 Pfam Pectinesterase 4 304 IPR000070 GO:0030599|GO:0042545
Dere03g2226 318 SUPERFAMILY Pectin lyase-like 4 316 IPR011050 -
Dere03g2226 318 Gene3D - 1 318 IPR012334 -
Dere03g2226 318 PANTHER PECTINESTERASE 3 308 - -
Dere03g2226 318 FunFam Pectinesterase 4 1 318 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere03g2226 Dere-ChrDere03 34879337 34883221 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2226 4 318 Carbohydrate Esterase AT2G26440 43.082 4.22e-85 264