Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2225 ATGGCTAATTACTCAACCAAAGTGTGCTTCATCTTTCTAACACTATCACTATTCTCATCACTTGCTTCTGCAGTTACAGTGTCCCTTGATGGCCTGGGAGATTACAGTACGATTGGGGAAGCCATAGCAGAAGCTCCTACCTACAGTGACAGCAAATACGTAATTAACATTCGACCAGGAATCTACGAGGAGCATCTCACCATTCCACGCCACAAACCTAACGTAGTTCTCGTAGGTGATGGTCACCACAACACCAAGATTGTCGGACATGATCACACTACCACTGGACCATTGTTTCTGACCGCCACAGTAGCAATTGAAGGAGTGGGCTTCGTGGGCCAAGGAATCGGATTTGTGAACTACGCTGGGCCCACCGCTGGCCCAGGAATAGCAGTAGTGAACACGGGAGACGAGTCCGCGTTCTTCAAATGTTCATTCGAAGGCTTCCAGGATACTCTATGGGCTTCATCGGGCCGTCAATTCTACCGAGAATGCGACATTTACGGCTCCGTCGATTTCATCATGGGAAACGCAGCTGCCGTTTTTCAAAACTGCATGCTCTACGCCCGGCTTACGGGCTCCGTGGTTTTCACAGCCCAATCTCGCGACAGCCCCATGCAACGCACCGGTTTTGTTTTCCAGTATTGTCGTTTTACGGTGTCGCCTGAGGAGGAATTATCTGGTGCGGGCAAAGCCACTTTGGGTCGGCCATGGAGGGCGTTTTCGAGGGTCGTGATAATGCGGTCGTATATTGATGCTATTGTGAGTCCGAGAGGGTGGAGCGTGATGGACGGGATACCTACTGATCATGCGACTTACATAGAGTTTGAGAATGAAGGGCCTGGATCAAGTACACGTGGCAGAGTGGGGTGGCCTGTTGTTAGAGAGGTGCATGATAAGAAGCTGGTGAGTCACTTCACTGTGTCGAGGTTTCTAGACGGTGATGCTTGGATTCCTCAAACTGGGGTTCCATACCTAGGAGGATTATCATAA 993 0.5015 MANYSTKVCFIFLTLSLFSSLASAVTVSLDGLGDYSTIGEAIAEAPTYSDSKYVINIRPGIYEEHLTIPRHKPNVVLVGDGHHNTKIVGHDHTTTGPLFLTATVAIEGVGFVGQGIGFVNYAGPTAGPGIAVVNTGDESAFFKCSFEGFQDTLWASSGRQFYRECDIYGSVDFIMGNAAAVFQNCMLYARLTGSVVFTAQSRDSPMQRTGFVFQYCRFTVSPEEELSGAGKATLGRPWRAFSRVVIMRSYIDAIVSPRGWSVMDGIPTDHATYIEFENEGPGSSTRGRVGWPVVREVHDKKLVSHFTVSRFLDGDAWIPQTGVPYLGGLS 330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2225 330 FunFam Pectinesterase 4 21 329 - -
Dere03g2225 330 Gene3D - 18 329 IPR012334 -
Dere03g2225 330 SUPERFAMILY Pectin lyase-like 21 328 IPR011050 -
Dere03g2225 330 Pfam Pectinesterase 25 315 IPR000070 GO:0030599|GO:0042545
Dere03g2225 330 PANTHER PECTINESTERASE 24 319 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere03g2225 Dere-ChrDere03 34875961 34878754 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2225 27 330 Carbohydrate Esterase AT3G05620 44.984 4.01e-85 265