Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere03g2210 | ATGATAAAGGCACTGATGATGGTTTTGGATGCTCAGGCTATTCAAATCAATTTTAGAGTTGGAACTCATGTTTGGGTTGAGGACCCTGAGGTCACTTGGATAGATGGAGAAATTGTGGACGCTGATGGAGAAGAAATCAAGGTGAAGTGTACGTCGGACAAGACGGTTGTGGTCAAAGCATCTAGTGTTCATCCCAAGGATCCTGAGTTCCCTCCTTCAGGTGTGGATGATATGACTAGGCTGGCATATCTGCACGAACCAGGGGTTCTCCAGAATTTGCAATGTCGATATGATCTTAATGAAATATATACATACACAGGAAATATATTGATTGCAGTGAACCCTTTTCAAAGATTACCTCATCTATATGGCCATGATGTGATGGAAAAATATAAAGGGGCGGCTATTGGTGAACTGACCCCTCATCCTTTTGCAATAGCTGATGCTGCATATAGGATGATGATAAATGAAGGAACAAGCCAATCAATTTTGGTCAGTGGAGAAAGTGGAGCTGGTAAAACAGAGAGCACAAAGATGCTTATGCATTATCTTGCCTTTATGGGTGGGAGAAAAGAAGCTGAGGGACGGTCTGTGGAGCAACAAGTTCTGGAGTCCAATCCTGTTTTAGAAGCATTTGGCAATGCAAAGACACTAAGAAACAATAATTCAAGTCGATTTGGTAAGTTTGTGGAGCTTCAGTTTGATCAGAGGGGGAGAATTTCAGGTGCTGCTATAAGAACTTATTTGCTGGAACGATCCCGTGTCTGTCAAGTTTCAGATCCAGAGCGAAATTATCATTGTTTTTATATGCTTTGTGCTGCACCCCCAGAGGATGTTAAGAGGTACAAATTGGGAAATCCAAGAACATTTCATTACCTAAACCAATCGAATTTCTATGAGTTGGCTGGATTGGATGAATCTAAGGAGTACCTTGCAACTAGGAGAGCTATGGACGTTGTTGGGATCACTTCTGATGAGCAGGATGCTATATTCAGAATAGTAGCTGCAGTACTACACTTAGGGAACATTGAATTTGCAAAGGGGGAGGAGCCAGATTCCTCAGAACCCAAGGATGATCAATCTCATTTCCACCTAAAAACTGCTGCTGAACTTTTGATGTGCGATGAGAAGTCACTTGAGGACTCCTTGTGCAAACGTGTTATGGTGACTCGTGGTGAGGCCATAACAAAATGGCTTGATCCAAATTCAGCAGTTCTCAGTAGAGATTCGTTGGCTAAAATAGTTTACTCCAAGCTGTTTGACTGGATTGTGAAAAGAATTAATAACTCTATTGGTCAAGATCCAAATTCGAAGAACTTAATTGGGGTTCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATCAACTTGACAAATGAGAAATTACAGCAACATTTCAACCAGCATGTCTTCAAATTGGAGCAAGAGGAATATACAAAGGAAGAAATTAATTGGAGTTATATAGAGTTCGTTGATAATCAGGATGTTCTTGATCTCATTGAGAAGAAACCTGGCGGAATCATTGCTCTTCTGGATGAGGCTTGTATGTTTCCAAGATCAACGCATGAAACATTTGCTGAAAAACTATATCAAACCTTTAAAGACAATAAACGCTTCAGCAAACCAAAGTTGTCTCGTACTGACTTCACCATTTGCCATTATGCTGGTGATGTCACTTATCAGACTGACTTGTTCCTTGACAAGAACAAAGATTATGTTGTTCCTGAGTTTGAGGCACTACTCTCTGCTTCGAAGTGCTCCTTTGTTTCAGGGTTGTTTCCACCTCTACTTGAGGAAACTTCCAAATCATCAAAGTTCTCTTCTATAGCCACCCAGTTTAAGGTCATCTTTTTTCTACCCATATGCTTCCAATTTATTGATTTCTGTTTTATTCTTTTCATTCTTAATTCATATTTTACGCAGCAACAACTACAAGCTTTGCTTGAAACGCTGAGTGCTACTGAGCCACATTACATTCGATGCATAAAGCCAAATAATCTTCTTAAGCCAGGGATATTTGAGAACACTAATGTATTGCAGCAGCTTCAGTGTGGGGGAGTAATGGAGGCAATTCGGATAAGTTGCGCTGGATATCCCACTAGAAAGAGCTTTGATGAATTTGTTAAGCGGTTTAGTGTCCTAGCACCTGATGTTCTAAAAGAATGCCCTGATGAGAGGACTGGTTGCACAAGGCTGCTAGGTAAAGTAAATCTTGAAGATTATCAGGTCGGGAAGACTAAAGTGTTTCTGAGAGCAGGACAGATGGCAAAACTAGATTCATGTCGTATTGAGGTCTTGGGAAGATCTGCAACCATTATTCAGAGTAAAGTTCGCTCGTATTATGGTCGAAAACGATACATTTTGTTGCAGTTGTCTGCCATACAAATGCAGATGATCTGTAGAGGAGAACTAGCACGCTGTCAGTACGAGAACATGAGGAGGGAAGCTGCTTCTGTGAAAATCCAAAAGAATGCTCGCGCGTATATATCTAGAGCTGCTTATAAAAGTTTGCGTGCCTCAGCTGTTTCGATTCAAACTGGTATGCGATGCATGGCTGCTAGAAATGAGCTCAGATGGAGGAGACGGACAGAAGCTGCAATTGTCATCCAAAGTCACTGCCGAGGTTATGTAGCCCGCATCCACCACCTAAGGCTAAAGAAAGCAGCAATCATTATACAGTGTGCCTTGAGGGGAGAAATGGCTCATAGAGAACTTCGAAAGCTTAAAATGGCTGACATTGAGCAGGAAAATGCAAAATTGCAATCTGCCTTGGAAGAGACTAAGGCACTGCTCATTCAGGAGCGCGAGGCGGCAAAAAAAGCTGACATTGAGCAGGAAAATGCAAAGTTGCAATCTGCCTTGGAAGAGACTAAGGCACTGCTTATTCAGGAGAGTGAGGTGGCCAAAAAAGTGGGTGAACTAAATCCTAATAGAGAAGAGTTTCCTGTTGTTGATAATGATTTGATCAAGAAGCTAACAGCTGAAAATGACCATCTCAAGGAATTGGTTAAGTCATTTGAGAAGAAAACTGATGACACACAGGGGAAATCTGTAGAGAGTGACAAGCTTATTGAAGAGCAAGACACTAAGGCACTATCCACTCAGGAACACGAAGCAGCAAAAATGGTAGCTGAGTTATCTTCTGGTGTACATGACTCTCCAATTGGTGATAGCGAATTGAACAATAAGCTTGCTGCAGAAAATGAACACCTTAGGGCACTGGTTAATTCATTAGAAAAGAAAATTGATGAAAGTAACAAACTTAGTGAAGAGCGCTTAAAGCAAGCCTCAGAGGCTGAAACAAAGATAATTGAGCTGAAGATGGCGATGCAGAGGCTTGAAGAAAAACTCTCTGATATAGAAACTGAGGATCAAATTTTGAGGCAGCAGACTCTACTGAGTTCATCTTCCAGGAGAATGTCGGGACATTTGTCATTTTCTAAAGCTCAGCCTTTGGAAAATGGTCATGATGATCCACAGAGTTCTCCAAGAAAAAAATATGGTACCGAGGCTGATAATGAGTTGAGGAAATCCCAAACTGAAAGACAACAAGAGAGTGTAGATGCTCTTCTGAAATGTGTGGCAGAAGCAGACCTTGGGTTCAGTGAAGGAAAACCAGTTGCAGCTTACACCATCTATAAGTGTCTGCTGCACTGGAAATCTTTTGAAGCAGAAAAGACAAGTGTATTTGATCGTCTTATTCTGGTGGTCGGTTCTGCTATTGAGGATCAGGACAATAATGATCCCATGGCTTATTGGTTATCCAATACATCTGCATTGTTATTTCTTCTTCAGCATAGTCTCAGACCACCTTCAGCACAGAAACCTCCTCCCCCTTCAACATCCTTTTTTGGGAGGATGGCCCAAAGTTTTCGTTCTTCCACTGCTGGTACTGCACTAGATACAATTCGCCAAGTTGATGCCAAGTATCCAGCTTTGCTTTTCAAGCAGCAGCTTACAGCATATGTGGAAAAGATTTATGGAATTGTCCGAGAGAATTTGAAGAAGGAATTGTCGCCTCTGATTTCTTCTTGCATTCAGGCACCTAAAACATCAGAGCAAAGCGTATCAGAACAGTCAAATGATAATAGCGCACTAGCTGGTTCTTGGCAGAACATTATCAATTGCCTTAACAAATTTCTCGATATGCTGAAAGAAAATTATGTGCCTCCTGTTCTAGTTCAGAAGATATTAACTCAGGTTTTCCAATACATCAATGTGCAACTCTTTAATAGCCTTCTTTCACATCAAGAATGCTGCACATTTAGCAATGGAGAATTTGTAAAATCTGGGTTGGATGAACTAGAAAAATGGTGTGGTGAAGCAACAGAAGAGCAGTATGCTGCTTCATCTTGGGATGAACTCAAACATGTGAGGCAAGCGGTTGGATTTTTGGTTAAAAATGAGAAGACTACAATATCCTACGATGATCTCACTAACGACCTGTGCCCTATCCTGAGTGTTCATCAGCTTTGTAAAATTTGTACACTTTACGGGGATGGCAGTGACAGTGCACAATGTGTATCAGCAGATGTAACTACGAGGTTGAAGCTTCTAATGACGGACGATGCTAATGATGATAGCTCCTCCTTCTTGCTGGACGATAATTCAAGTATCCCGTACTCAGTTGATGAGGTTATTAATACCCTTTATGGAAGTAACTCTCTAAGAGTACAAGCGCCAGCGGAACTTCTTAAGAATGCAGCCTTCCAATTTTTACAGGATTAA | 4749 | 0.4112 | MIKALMMVLDAQAIQINFRVGTHVWVEDPEVTWIDGEIVDADGEEIKVKCTSDKTVVVKASSVHPKDPEFPPSGVDDMTRLAYLHEPGVLQNLQCRYDLNEIYTYTGNILIAVNPFQRLPHLYGHDVMEKYKGAAIGELTPHPFAIADAAYRMMINEGTSQSILVSGESGAGKTESTKMLMHYLAFMGGRKEAEGRSVEQQVLESNPVLEAFGNAKTLRNNNSSRFGKFVELQFDQRGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKRYKLGNPRTFHYLNQSNFYELAGLDESKEYLATRRAMDVVGITSDEQDAIFRIVAAVLHLGNIEFAKGEEPDSSEPKDDQSHFHLKTAAELLMCDEKSLEDSLCKRVMVTRGEAITKWLDPNSAVLSRDSLAKIVYSKLFDWIVKRINNSIGQDPNSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKLEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTICHYAGDVTYQTDLFLDKNKDYVVPEFEALLSASKCSFVSGLFPPLLEETSKSSKFSSIATQFKVIFFLPICFQFIDFCFILFILNSYFTQQQLQALLETLSATEPHYIRCIKPNNLLKPGIFENTNVLQQLQCGGVMEAIRISCAGYPTRKSFDEFVKRFSVLAPDVLKECPDERTGCTRLLGKVNLEDYQVGKTKVFLRAGQMAKLDSCRIEVLGRSATIIQSKVRSYYGRKRYILLQLSAIQMQMICRGELARCQYENMRREAASVKIQKNARAYISRAAYKSLRASAVSIQTGMRCMAARNELRWRRRTEAAIVIQSHCRGYVARIHHLRLKKAAIIIQCALRGEMAHRELRKLKMADIEQENAKLQSALEETKALLIQEREAAKKADIEQENAKLQSALEETKALLIQESEVAKKVGELNPNREEFPVVDNDLIKKLTAENDHLKELVKSFEKKTDDTQGKSVESDKLIEEQDTKALSTQEHEAAKMVAELSSGVHDSPIGDSELNNKLAAENEHLRALVNSLEKKIDESNKLSEERLKQASEAETKIIELKMAMQRLEEKLSDIETEDQILRQQTLLSSSSRRMSGHLSFSKAQPLENGHDDPQSSPRKKYGTEADNELRKSQTERQQESVDALLKCVAEADLGFSEGKPVAAYTIYKCLLHWKSFEAEKTSVFDRLILVVGSAIEDQDNNDPMAYWLSNTSALLFLLQHSLRPPSAQKPPPPSTSFFGRMAQSFRSSTAGTALDTIRQVDAKYPALLFKQQLTAYVEKIYGIVRENLKKELSPLISSCIQAPKTSEQSVSEQSNDNSALAGSWQNIINCLNKFLDMLKENYVPPVLVQKILTQVFQYINVQLFNSLLSHQECCTFSNGEFVKSGLDELEKWCGEATEEQYAASSWDELKHVRQAVGFLVKNEKTTISYDDLTNDLCPILSVHQLCKICTLYGDGSDSAQCVSADVTTRLKLLMTDDANDDSSSFLLDDNSSIPYSVDEVINTLYGSNSLRVQAPAELLKNAAFQFLQD | 1582 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere03g2210 | 1582 | FunFam | Class V myosin | 450 | 591 | - | - | |
| Dere03g2210 | 1582 | Gene3D | - | 263 | 321 | - | - | |
| Dere03g2210 | 1582 | MobiDBLite | consensus disorder prediction | 1139 | 1155 | - | - | |
| Dere03g2210 | 1582 | MobiDBLite | consensus disorder prediction | 1139 | 1190 | - | - | |
| Dere03g2210 | 1582 | ProSiteProfiles | IQ motif profile. | 796 | 825 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | Gene3D | - | 871 | 919 | - | - | |
| Dere03g2210 | 1582 | Gene3D | - | 823 | 870 | - | - | |
| Dere03g2210 | 1582 | Gene3D | - | 773 | 822 | - | - | |
| Dere03g2210 | 1582 | Coils | Coil | 996 | 1016 | - | - | |
| Dere03g2210 | 1582 | ProSiteProfiles | IQ motif profile. | 892 | 921 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | CDD | MYSc_Myo11 | 87 | 758 | IPR036018 | - | |
| Dere03g2210 | 1582 | Coils | Coil | 1068 | 1098 | - | - | |
| Dere03g2210 | 1582 | FunFam | Myosin heavy chain | 263 | 318 | - | - | |
| Dere03g2210 | 1582 | ProSiteProfiles | Myosin motor domain profile. | 73 | 770 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | FunFam | unconventional myosin-Va | 871 | 919 | - | - | |
| Dere03g2210 | 1582 | PANTHER | MYOSIN | 65 | 872 | - | - | |
| Dere03g2210 | 1582 | CDD | MyosinXI_CBD | 1188 | 1551 | IPR037975 | GO:0007015 | |
| Dere03g2210 | 1582 | Pfam | DIL domain | 1404 | 1505 | IPR002710 | - | |
| Dere03g2210 | 1582 | Coils | Coil | 1103 | 1137 | - | - | |
| Dere03g2210 | 1582 | ProSiteProfiles | IQ motif profile. | 844 | 873 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | ProSiteProfiles | IQ motif profile. | 869 | 895 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | ProSiteProfiles | IQ motif profile. | 821 | 850 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 46 | 824 | IPR027417 | - | |
| Dere03g2210 | 1582 | MobiDBLite | consensus disorder prediction | 1165 | 1190 | - | - | |
| Dere03g2210 | 1582 | PRINTS | Myosin heavy chain signature | 207 | 234 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | PRINTS | Myosin heavy chain signature | 103 | 122 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | PRINTS | Myosin heavy chain signature | 160 | 185 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | PRINTS | Myosin heavy chain signature | 440 | 468 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | PRINTS | Myosin heavy chain signature | 493 | 521 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | Pfam | Myosin N-terminal SH3-like domain | 21 | 63 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | Pfam | IQ calmodulin-binding motif | 894 | 913 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | Pfam | IQ calmodulin-binding motif | 870 | 888 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | Pfam | IQ calmodulin-binding motif | 799 | 816 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | Pfam | IQ calmodulin-binding motif | 823 | 842 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | Coils | Coil | 917 | 970 | - | - | |
| Dere03g2210 | 1582 | SMART | MYSc_2a | 67 | 771 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | FunFam | Myosin 2 | 323 | 439 | - | - | |
| Dere03g2210 | 1582 | Pfam | Myosin head (motor domain) | 75 | 758 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | Gene3D | - | 450 | 661 | - | - | |
| Dere03g2210 | 1582 | ProSiteProfiles | Dilute domain profile. | 1238 | 1529 | IPR002710 | - | |
| Dere03g2210 | 1582 | SMART | iq_5 | 820 | 842 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | SMART | iq_5 | 843 | 865 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | SMART | iq_5 | 795 | 817 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | SMART | iq_5 | 868 | 890 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | SMART | iq_5 | 772 | 794 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | SMART | iq_5 | 891 | 913 | IPR000048 | GO:0005515 | |
| Dere03g2210 | 1582 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 823 | 918 | IPR027417 | - | |
| Dere03g2210 | 1582 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 19 | 68 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Dere03g2210 | 1582 | SMART | DIL_2 | 1403 | 1511 | IPR002710 | - | |
| Dere03g2210 | 1582 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 323 | 612 | - | - | |
| Dere03g2210 | 1582 | Gene3D | Kinesin motor domain | 76 | 700 | IPR036961 | - | |
| Dere03g2210 | 1582 | Gene3D | - | 705 | 768 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere03g2210 | Dere-ChrDere03 | 34684743 | 34713124 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere03g2210 | 16 | 1581 | Myosins gene family | AT5G43900 | 61.543 | 0.0 | 1921 |