Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2183 ATGGCCTTCACGCCCATGTTTTGCAGAGAAAAGGGATTGGGATTTTTGCACAGAATATCTTGGCAAACCGATCAAAGATCCCCACTCTCTGTGCGAAAAGGCAAGCTGGCTTTGGTAGGTCTCTTAACAATTAAGATGTCTGGGAATTTCAATAAAAGGAGTGCGTTGGCAGGCTGGCGTTCTGGTATTTTACTGTTATTGACTTTACTTCTTTATACTACAGAGGGGTTGAACACAGAGGGGCAGTACCTCCTGGGGCTGAAGAATAGTCTTCATGATGAATCTAATCATTTGGCGAATTGGAAGTCTACTGATGAAACACCGTGTGGATGGACAGGTGTAAGGTGTACTTCTGACAATAATCTAGCGGTCTGGTACCTTAATTTGAGTTCAATGAATCTTTCTGGAACTCTAAATCCTAGCATTGGGGGTCTGGCACACCTAACTTATCTCATTCTTGCCTACAATGGGCTGATGGGAAGTATACCCAAGGAAATTGGAAATTGCTCGAGCTTAGAATATCTTCATTTGAACAATAATCGATTCGAGGGACAAGTTCCTGTTGAATTGGGTAAGCTGACCCTTTTGAGAAGTCTAAATATTTGCAACAACAAAATTTCGGGTTCTCTTCCAGATGAGTTGGGGAATTTGTCTTCATTGGTTGAGCTTGTGGCCTACACAAACAATCTGACTGGCCCCCTGCCTCGTTCTATTGGAAATCTCAAGAGTCTCACAACTTTGAGAGCTGGGGGAAATGGAATATCTGGTAGCTTGCCGCGTGAGATTGGTGGATGTAAGAGCTTGGAATTTCTTGGTCTTGCTCAAAATCAAATAGGAGGGGAACTACCGAGAGAGATAGGTATGCTTCAGAACTTAAGAGAACTGATTTTATGGAATAACCAGTTATCAGGACTTATTCCTAAAGAGCTTGGGAATTGTACTACCCTTGATACCCTTGCTTTATATGGAAATGCTCTTGTTGGACCTATACCTGAGGAGATTGGGAATCTCAAATCTCTGAAGAAGTTGTACCTTTACAGAAATAAGTTGAATGGAACCATTCCAAGGGCAATTGGGAATCTTTCTCTGGCAGTAGAAATTGATTTCTCAGAGAACTCTTTAGTGAGTGAAATTCCCCCTGAGATCAGCAAAATAAGTGGTCTACGCTTGCTCTTTCTCTTTGAGAACCAGCTATCTGGTGTTATACCAAACGAGCTTAGTAGCTTGAGGTACCTGACAAGGCTGGACCTGTCCATTAATAATCTCACTGGTCCCATTCCATCGGGGTTCCAGTATTTGACTCGAATGTCTCAGTTGCAACTTTTTGACAACTCTCTAAGTGGAAATATTCCTCAGAGCCTTGGACTTTATAGTCCTCTTTGGGTGGTTGATTTTTCTGACAATTACTTGACAGGAAGAGTACCTCCTCATCTGTGTCGAAATTCTAAGTTGATGTCGTTGAATATGGCTTATAATAAGCTGTATGGAAATATACCGACTGGGATCTTGAACTGTGAAACATTGGCACAGCTGCTATTGGTTGGAAATAGTCTTACTGGTGGCTTTCCTTCAGAACTCTGCAAATTAATGAACCTTACTGCAATTGAGTTGAGCCAGAATAGGTTCAGTGGTCCTATTTCTCCTGAGATTGGGAGCTGCCAGAAGTTGCAGAGGCTTCATATTGCTAACAACTACTTCACATTAGAGTTGCCTAAGGAAATAGGAAATCTCTCTCAGTTAGTGACCTTCAATGTTTCATCCAATTCTTTCATTGGACCAATCCCACGTGAAATTGTTAGGTGCACGAAGCTTCAGCGACTAGATCTCAGCCAGAACAGCTTTACTGGTTCCCTACCAGATGAGCTAGGAACGCTCTCGCAGTTGGAGCTTCTCAAGCTCTCAGATAATAAGATCACCGGGCATATTCCTCCAGCATTAGGTAATTTGCTTCATTTGACAGCGTTGCAGATGGGTGGCAATTTACTTTCTGGTGAAATACCTCCTGATCTGGGTAATCTTTCAAGCTTACAGATTGCATTGAATCTCAGTTATAATAACCTTACTGGAAGTATACCTGATAAGCTTGGCAATATCAATTTGCTCGAGTTCCTCCTTCTCGATAACAATCATCTGAATGGTGAAATACCCAGCACATTAGAAAACCTTTCAAGCTTGTTGGGGTGTAATTTCTCATACAATAATCTCTCTGGACCGATACCTTCCATTCCGCTATTTGAGAATATGGCAATTAGCAGCTTTGTTGGTAACAATGGCCTCTGTGGTGCTCCTCTACTTGACTGCAACACCAATCCATCTTCTCTTTCTGATCCTCCTGTGAAAAGTGCCGGTGCTCGTCGCACCAAAATTATCACAATAATTGCAACAGCTGTTGGTGGTGTTTCTCTTATTCTAATATTTATCATTTTATATATTATGAGACGTCCTCCTGAGTCTGTTTCTTCACTTGGGGATTCTGAGATTCCCTCTTCAGATTCAGATATCTATTTTCCTCCTAAAGATGGCTTCACCTTCCAAGACCTACTTGAAGCTACCCACAATTTCCATGAAAGTTATGTTATTGGAAGAGGGGCTTGTGGAACAGTTTATAAGGCAGTGATGCTATCTGGGAAGACTATTGCTGTGAAAAAGTTAGCATCCAACAGGGAAGGGAACAACATTGAGAACAGCTTCCGGGCTGAGATATTAACTCTTGGAAAGATAAGGCATCGAAATATAGTGAAGCTGTATGGGTTTTGCTATCACCAAGGTTCCAATCTCCTACTATATGAGCACATGGCAAGGGGTAGCTTAGGGGAACAGCTTCATGGACTTGCATGTAATTTGGAATGGCCAACTCGGTTCATTATTGCTCTTGGAGCTGCGGAGGGTCTTGCCTACTTGCATCATGACTGCAAACCAAAGATCATTCACCGTGATATAAAATCAAATAACATTCTACTTGATGAAAACTTTGAGGCCCATGTGGGTGATTTTGGTTTGGCAAAAGTCATTGACATGCCTCAATCAAAATCGATGTCAGCAGTTGCTGGATCATATGGTTATATTGCTCCTGAATATGCATATACTATGAAGGTCACTGAGAAGTGTGACATCTATAGCTATGGGGTTGTTCTGTTGGAGTTGCTAACAGGAAGAACTCCAGTTCAGCCACTAGAGCAAGGAGGTGATCTGGTGACATGGGTCAGAAACTATATTCGAAACCATAAGAACACATTGTCCTCTGGAGTGCTTGACAGTCGTCTCAATCTTCAAGATCAAACCACTGTGAACCACATGCTCACTGTTCTCAAGATTGCTTTGCTCTGCACAAACACGGCCCCTCTTGATCGCCCATCCATGCGCCAAGTTGTGTTGATGCTTGTGGAGTCAAACGAGCGAGAAGGGTACATAGCCATTTCTCCAAGCCATGATGAGGATCTTCCTGCCAAAGAAGATGACACGCGAAAGAGTATATGA 3477 0.4239 MAFTPMFCREKGLGFLHRISWQTDQRSPLSVRKGKLALVGLLTIKMSGNFNKRSALAGWRSGILLLLTLLLYTTEGLNTEGQYLLGLKNSLHDESNHLANWKSTDETPCGWTGVRCTSDNNLAVWYLNLSSMNLSGTLNPSIGGLAHLTYLILAYNGLMGSIPKEIGNCSSLEYLHLNNNRFEGQVPVELGKLTLLRSLNICNNKISGSLPDELGNLSSLVELVAYTNNLTGPLPRSIGNLKSLTTLRAGGNGISGSLPREIGGCKSLEFLGLAQNQIGGELPREIGMLQNLRELILWNNQLSGLIPKELGNCTTLDTLALYGNALVGPIPEEIGNLKSLKKLYLYRNKLNGTIPRAIGNLSLAVEIDFSENSLVSEIPPEISKISGLRLLFLFENQLSGVIPNELSSLRYLTRLDLSINNLTGPIPSGFQYLTRMSQLQLFDNSLSGNIPQSLGLYSPLWVVDFSDNYLTGRVPPHLCRNSKLMSLNMAYNKLYGNIPTGILNCETLAQLLLVGNSLTGGFPSELCKLMNLTAIELSQNRFSGPISPEIGSCQKLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNSFIGPIPREIVRCTKLQRLDLSQNSFTGSLPDELGTLSQLELLKLSDNKITGHIPPALGNLLHLTALQMGGNLLSGEIPPDLGNLSSLQIALNLSYNNLTGSIPDKLGNINLLEFLLLDNNHLNGEIPSTLENLSSLLGCNFSYNNLSGPIPSIPLFENMAISSFVGNNGLCGAPLLDCNTNPSSLSDPPVKSAGARRTKIITIIATAVGGVSLILIFIILYIMRRPPESVSSLGDSEIPSSDSDIYFPPKDGFTFQDLLEATHNFHESYVIGRGACGTVYKAVMLSGKTIAVKKLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHQGSNLLLYEHMARGSLGEQLHGLACNLEWPTRFIIALGAAEGLAYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPLEQGGDLVTWVRNYIRNHKNTLSSGVLDSRLNLQDQTTVNHMLTVLKIALLCTNTAPLDRPSMRQVVLMLVESNEREGYIAISPSHDEDLPAKEDDTRKSI 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2183 1158 SMART serkin_6 854 1127 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2183 1158 Pfam Protein kinase domain 855 1124 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2183 1158 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 457 771 - -
Dere03g2183 1158 Gene3D Ribonuclease Inhibitor 330 433 IPR032675 -
Dere03g2183 1158 Gene3D Ribonuclease Inhibitor 229 329 IPR032675 -
Dere03g2183 1158 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase isoform B 329 433 - -
Dere03g2183 1158 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 76 235 - -
Dere03g2183 1158 SMART LRR_typ_2 673 698 IPR003591 -
Dere03g2183 1158 SMART LRR_typ_2 193 217 IPR003591 -
Dere03g2183 1158 SMART LRR_typ_2 241 265 IPR003591 -
Dere03g2183 1158 SMART LRR_typ_2 289 312 IPR003591 -
Dere03g2183 1158 SMART LRR_typ_2 337 361 IPR003591 -
Dere03g2183 1158 SMART LRR_typ_2 145 169 IPR003591 -
Dere03g2183 1158 SMART LRR_typ_2 625 649 IPR003591 -
Dere03g2183 1158 Pfam Leucine rich repeat N-terminal domain 78 116 IPR013210 -
Dere03g2183 1158 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 932 1142 - -
Dere03g2183 1158 ProSitePatterns Serine/Threonine protein kinases active-site signature. 975 987 IPR008271 GO:0004672|GO:0006468
Dere03g2183 1158 Gene3D Ribonuclease Inhibitor 76 228 IPR032675 -
Dere03g2183 1158 SUPERFAMILY RNI-like 378 742 - -
Dere03g2183 1158 SUPERFAMILY Protein kinase-like (PK-like) 829 1127 IPR011009 -
Dere03g2183 1158 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 821 931 - -
Dere03g2183 1158 ProSiteProfiles Protein kinase domain profile. 854 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2183 1158 Gene3D Ribonuclease Inhibitor 434 771 IPR032675 -
Dere03g2183 1158 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 280 380 - -
Dere03g2183 1158 SUPERFAMILY L domain-like 92 447 - -
Dere03g2183 1158 Gene3D Phosphorylase Kinase; domain 1 826 931 - -
Dere03g2183 1158 Pfam Leucine rich repeat 291 350 IPR001611 GO:0005515
Dere03g2183 1158 Pfam Leucine Rich Repeat 603 623 IPR001611 GO:0005515
Dere03g2183 1158 Gene3D Transferase(Phosphotransferase) domain 1 932 1144 - -
Dere03g2183 1158 FunFam Probable leucine-rich repeat receptor-like protein kinase At2g33170 236 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2183 Dere-ChrDere03 34420312 34425807 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2183 77 1149 Receptor kinase-like Gene Family AT4G26540 36.748 0.0 634
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dere03g2183 Pkinase 2.5e-46 CL0016