Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2181 ATGAGTCGTTGTGGTACCTCAAGATGGTGTCCAACCCAAGAACAGCTTATGATTCTGGAGGAGATGTATAGAGGTGGGATCAGAACTCCAAATGCCTCCCAAATTCAGCATATCACAGCCCAACTTTCTTTGTATGGGAAGATAGAGGGCAAGAATGTGTTCTATTGGTTTCAGAATCACAAGGCAAGGGATAGACAGAAACTCCGAAGGAGATTGAACAAGCAACTCCAGCTACAGCAGCAACAACTCCAACTCTATAACTATCACCTTCAGCTTCATCTGAACCAGAGTTATAATCACCAATTTCACTGCAATATGGAGTCTGTCATTAGTGCTTCATCTTCCCAACAACATTCTTTTTGTAACTCCCTTGCCTCGTTTTCAGAGGAAGGACCAGGAGAAGCATCAAAACAGGGTATAGATTACAAATGGAAGATTGATAATGCAGAGGGATCAGTGGTGGGGAAAACAATGAAGGAAGATTGGAGGAGGATGATGATGATGGAAGTGGGCCCAACTGCTTCATATTGGCCCAGACCCCTCAAGACTCTCGAACTATTCCCAATTTGCGACAGACTCAAAGCAGAGTGA 591 0.4399 MSRCGTSRWCPTQEQLMILEEMYRGGIRTPNASQIQHITAQLSLYGKIEGKNVFYWFQNHKARDRQKLRRRLNKQLQLQQQQLQLYNYHLQLHLNQSYNHQFHCNMESVISASSSQQHSFCNSLASFSEEGPGEASKQGIDYKWKIDNAEGSVVGKTMKEDWRRMMMMEVGPTASYWPRPLKTLELFPICDRLKAE 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2181 196 FunFam WUSCHEL-related homeobox 4 6 73 - -
Dere03g2181 196 Pfam Homeodomain 7 66 IPR001356 GO:0003677
Dere03g2181 196 SMART HOX_1 4 71 IPR001356 GO:0003677
Dere03g2181 196 Gene3D - 6 74 - -
Dere03g2181 196 CDD homeodomain 8 67 IPR001356 GO:0003677
Dere03g2181 196 SUPERFAMILY Homeodomain-like 7 67 IPR009057 -
Dere03g2181 196 ProSiteProfiles 'Homeobox' domain profile. 2 67 IPR001356 GO:0003677
Dere03g2181 196 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 2 191 IPR044555 GO:0003700|GO:0099402
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2181 Dere-ChrDere03 34409881 34411216 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2181 1 74 Wox Gene Family AT2G28610 78.378 2.12e-38 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dere03g2181 Homeodomain 3.2e-18 CL0123