Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2178 ATGAAATTTCCAGCGACCATATGGGTGGTGGTCGGGCTAGCCACATTGGTAATAGTGATGGCCACAGTACAGCCAGCACAATACTTTCTGGGGACAGAGTACGAGGTTCGAGTTATCAATGGCTTCCGAAACAACTCCTCTCTGCCATTGGTGATATGGTGCTCCTCCGAGGAAGCCGATCTGGGAGGACGAGCCCTGCAGGAGCACGACGACTTCAGCTGGAAGATGAGGCCCAACTTCTGGAGCAGCAACCTCATGAAGTGTACCATGAAATGGGACCAAACCAGGAAGAAGTTTGACGCCTTTAAAGCTTCCAGAGACGTTCACAGGTGTGGCCCCTTCAAGATGTGCTCCTGGATGGTTACAGAGGATGGCTTTTACTTCAGCAACGACCAAGTCAACTGGTACAAGGACTTCGAATGGTGA 426 0.5117 MKFPATIWVVVGLATLVIVMATVQPAQYFLGTEYEVRVINGFRNNSSLPLVIWCSSEEADLGGRALQEHDDFSWKMRPNFWSSNLMKCTMKWDQTRKKFDAFKASRDVHRCGPFKMCSWMVTEDGFYFSNDQVNWYKDFEW 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2178 141 PANTHER - 32 135 IPR010264 -
Dere03g2178 141 Pfam Plant self-incompatibility protein S1 36 141 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2178 Dere-ChrDere03 34385268 34385693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2178 25 125 Carbohydrate Esterase AT3G16970 29.524 1.50e-07 45.8