Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2161 ATGTCATCCTCCGACGTATCCGTTCGAACTCCGCGCCTCATGGAACGTTTTCCTCTTGCTCTCTCTCTCTCTCTCAAGCCTTGCCTCACAAACAAACCCGTTTTTTGGTTTCACCAAAACCCAAAGTACTCAAACTCCATTTTTTTCTTTTCGGTGCTTCGTGGATACCCACGATTCTCAAATCTTCCATTTCCTATTCACCAACCTCTCGAGCATAGATTTCAGGCTTCCAGCCAATCTATGGACATTCAAACAGGTAACCAATTCTTTAAATCAATATCTTTATGTGTAGTTTTACGCCCATTGCTCTCATTTGAACCTTTGACCCCGGTCTGGGTTCAAATTCGTAACTTCATCTATGGAACTAACGTTGAGGCTCCAGGTACTCTAGGCCAACGACATAAAGGTGCAGTAACTGCTGGTTCAAGTGATAGAATCCTTTCAGACAGCAATGAAGAGACAGGAGAAGAATTTTCAGCTGAGTTCTACCGGGATCGGTTTGGTTTAAGGAGACTACCTGTCACAACTGAAGTGGACAGTCGGCAGCCAAATAGATTAGGTTTTGATTATAATCAGAATTATCAGCCGGTTTATGATGATCGTGCACGTGTTCTTGGGCTGAGGAGAATGGATTCTGATAGTAACTCAGATTTGTCTGATTTTGCTCCAACAACAGGACATGTCGCTGAACTTGAAAACTGGGCATATCCTAAGAATATGAACAAATTCCAGTGGGAACATGGTGGTATTGGACAACGATCAGGTAAATTTGCTGAAGAAATTTATTCTGATCAATTTTCTTTGGGACCAACTGCTCCAGCCACTTATGTACCTGAATCCCCTAAGTCATGCCATCCTTATCAATCACCAATTTCAGATGCTTCTTTTTATAAGAAGATAAAGTTTCTTTGTAGCTTTGGGGGAAGAATATTACCAAGGCCAAATGATGGGAAGCTCAGATATGTGGGTGGAGAAACACGGATTATATCCATCGGGAAAAACATTTCTTGGGAGCAACTTATGGAGAAGACTTATGCAATTTGCAATCAAGCTCATATTATCAAGTACCAGCTTCCTGGAGAGGATCTGGATGCTCTTATTTCTGTTTGTTCTGATGAGGATCTTCATCATATGATAGAGGAGTATGAAGAACTGGAAAGAATTGGAGGCTCTCAACGATTGCGGATATTTCTCATATCTTCAAGTGAACCTGAGAGCCCCAACTCTATTGAATCAAAAGTCAATCAGCCAGGTGATGTTGATTATCAGTATGTTGTTGCCGTTAATGGCATGCTGGACCGAAGTCCACGGAAGAGCTGCAGTGGGCAAAGCCAAACAAGTCAGTTTGGAAATACTAGTCCAAGATATTTTAAGGAATCACCTACATCTGCATATCCTTGGGATGTGAAGGATCGTAGCCCACGGTCCCCCCGTTTGGGAGGATTACTCCCCAAACCTGGTCCTCAATTCTTAACAGCACTTCAAGTGCCAGGCAAGTCATTCAGTCAATCACCACCTAGTCCTATAGCTCATATTTGTGTTCAGCCTAAAGATCCTAAGATTTCCAATGTCGAGCTATTTATGGATCAACCATGCAATGTTGGTAATGAAGGTTGTATTCCCTTTGTAATGGAAAGAATTCCATGTGGCAATTCCTATGTTGATCAAATTGCATACTACAACAATCTGGCTCAAGGGCCTCCCTTTCTGAATTACCATCATTATAATCAACATAAAGTGGAGGTTGATCAGCTCAAGAATCCTAGTGATGATGTTCAATATCACATGAGAAGCCACAGTGAAGACTTTGTCTCTTCTGTAACATGTAGTCAAAGTAATATGATATTTGAGAGACCCACACGTACAAATGAAGGTTCATACCATTTTGACAAGACTGTCTCTCATCCTAATCAGTCATCATTATTGATTTCAGTGTCTAATGAGAGAGACAGAGAGGGATCTCATTGCAGATTGTTGCATGCACTTTCTGATCCAGTATTGCAGAAGAGTGATGAGAGCTTTGAAGATCATTTGCAGCCCTCCCATAGAGTAAAAGAAAGAAAACCACCTTTACTGAAAATTTCAAGTTCCTTTCGTGCAAGGCCATTACAGCAGGGACAGATAATTGATGGGAATGATCAGGTGGCTAGGTGTCAAATTTTGCCCACTATTGGAATGACTGACAGTTGCAAGGGGGTTTTGGATTCTGGTCAAGAGAGCTTGCTCTGTGCAGATAATAACCATGCCAGCTCTGACGACATTAGAAGATACTTTGAAGGTAATATTGAAGTTACATCAGATGACAATGTCTTGCATTATAGAGATTTGGAGTACATTGACTACCAACAAGGTGCTTGCCCATCTTTAATGGAGTTACAAAGCAGTGCATGCAATTTAACTGCTTCCTCATTAAATTTTAAATCCACAATAAACCTAAATGAACAACCACATAATTTGCAACAAAACATTGCTGCTTCTGAGGTTCTTGCAAGGAGCCAAAATTCTACAATTTATCAGCAATTTGCTATGTCTGAAACAGAAAACAACCGATCATTTCCCGTTGGCTCCTCTGATTTACAGCTTACTGACACCCAAACTGACATAGAGTCCATACTGCTAGTCTCTAATACAAAGAAGGGATCAGCTTCCAGAGGAGAGACTTTTCTCCCTGATGAAAATCCTGCTTATTGTCCTTACCAGAAGAATGAAAAAACTATCATTGACCTGGATTCTTTTGTTGGGCATAACAATGAGTTATGTGATCAATCACAGAGCTCCATGGGCTGTCACGAAATCAAGATGCTAAATCCAGAAGCTGTTGTCATAGAATCAACTGATAGTATATTGTCATGCATTCAGTTATCCTCTGAAGTTGTCTCAGATGTAGATGAAGAGGTTGAACCTGAATCTGCATCTCCTGAAAAGGAAGAGACAAAAAGTGTCAGTCCAGAATCTCAAAGTGAGCTTGCAAAAGGTGATAGTAGAAACTTCAATAAGCTAATTGGGTCTGCAACTGCTGAAACAGAGGCTGAAGTCTATGGTTTGCAGATTATTAAAAATGCTGATATCGAAGAATTGCGAGAGTTAGGATCTGGAACATTTGGAACTGTTTATCATGGAAAGTGGAGGGGAACAGATGTTGCGATTAAGAGGATAAAAAGTAGTTGCTTTTCTGGCAGATTATCAGAGCAAGAGCGGTTGACTAAAGATTTCTGGCGTGAGGCACAAATTTTGTCAACTCTTCACCATCCAAACGTTGTGGCCTTTTATGGGGTAGTTCCAGATGGCCCAGGTGGGACATTGGCAACTCTAACAGAATATATGGTGCATGGATCACTGAGGAATGTCCTTTTGAGGAAGGATAGAATGCTTGACCGCCGAAAAAAGCTTATGATTGCAATGGATGCAGCCTTTGGGATGGAATATTTGCATTTTAAGAATATTGTTCATTTTGATTTGAAGTGTGATAATTTACTTGTCAATTTGGGGGATCCTGAACGACCTGTATGCAAGGTTGGTGATTTTGGCCTATCAAGAATTAAGCGCAACACACTTGTTTCCGGTGGTGTCAGAGGAACCCTTCCCTGGATGGCACCGGAATTATTAGATGGTAACAGTAGTGGGGTCTCTGAGAAGGTTGGTGGGATTGTCAATAATACACTTAGGCCTCCAATTCCAAAACGTTGTGATTCTGAGTGGAAAAAGCTGATGGAAGACTGCTGGAGCCCTGATCCTGAAGCCAGACCATCCTTTACAGAAATTACAAATAGATTGCGCATTATGCAGGCGGCTCTGCAGAAGAAGAGACACCATCCTGCAACTGGATAA 3828 0.413 MSSSDVSVRTPRLMERFPLALSLSLKPCLTNKPVFWFHQNPKYSNSIFFFSVLRGYPRFSNLPFPIHQPLEHRFQASSQSMDIQTGNQFFKSISLCVVLRPLLSFEPLTPVWVQIRNFIYGTNVEAPGTLGQRHKGAVTAGSSDRILSDSNEETGEEFSAEFYRDRFGLRRLPVTTEVDSRQPNRLGFDYNQNYQPVYDDRARVLGLRRMDSDSNSDLSDFAPTTGHVAELENWAYPKNMNKFQWEHGGIGQRSGKFAEEIYSDQFSLGPTAPATYVPESPKSCHPYQSPISDASFYKKIKFLCSFGGRILPRPNDGKLRYVGGETRIISIGKNISWEQLMEKTYAICNQAHIIKYQLPGEDLDALISVCSDEDLHHMIEEYEELERIGGSQRLRIFLISSSEPESPNSIESKVNQPGDVDYQYVVAVNGMLDRSPRKSCSGQSQTSQFGNTSPRYFKESPTSAYPWDVKDRSPRSPRLGGLLPKPGPQFLTALQVPGKSFSQSPPSPIAHICVQPKDPKISNVELFMDQPCNVGNEGCIPFVMERIPCGNSYVDQIAYYNNLAQGPPFLNYHHYNQHKVEVDQLKNPSDDVQYHMRSHSEDFVSSVTCSQSNMIFERPTRTNEGSYHFDKTVSHPNQSSLLISVSNERDREGSHCRLLHALSDPVLQKSDESFEDHLQPSHRVKERKPPLLKISSSFRARPLQQGQIIDGNDQVARCQILPTIGMTDSCKGVLDSGQESLLCADNNHASSDDIRRYFEGNIEVTSDDNVLHYRDLEYIDYQQGACPSLMELQSSACNLTASSLNFKSTINLNEQPHNLQQNIAASEVLARSQNSTIYQQFAMSETENNRSFPVGSSDLQLTDTQTDIESILLVSNTKKGSASRGETFLPDENPAYCPYQKNEKTIIDLDSFVGHNNELCDQSQSSMGCHEIKMLNPEAVVIESTDSILSCIQLSSEVVSDVDEEVEPESASPEKEETKSVSPESQSELAKGDSRNFNKLIGSATAETEAEVYGLQIIKNADIEELRELGSGTFGTVYHGKWRGTDVAIKRIKSSCFSGRLSEQERLTKDFWREAQILSTLHHPNVVAFYGVVPDGPGGTLATLTEYMVHGSLRNVLLRKDRMLDRRKKLMIAMDAAFGMEYLHFKNIVHFDLKCDNLLVNLGDPERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNSSGVSEKVGGIVNNTLRPPIPKRCDSEWKKLMEDCWSPDPEARPSFTEITNRLRIMQAALQKKRHHPATG 1275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2161 1275 Pfam Protein tyrosine and serine/threonine kinase 1025 1205 IPR001245 GO:0004672|GO:0006468
Dere03g2161 1275 Pfam Protein tyrosine and serine/threonine kinase 1215 1258 IPR001245 GO:0004672|GO:0006468
Dere03g2161 1275 CDD PB1_UP2 303 399 - -
Dere03g2161 1275 PANTHER SERINE-THREONINE PROTEIN KINASE 366 1260 - -
Dere03g2161 1275 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 319 401 - -
Dere03g2161 1275 MobiDBLite consensus disorder prediction 960 993 - -
Dere03g2161 1275 Gene3D Transferase(Phosphotransferase) domain 1 1212 1274 - -
Dere03g2161 1275 Gene3D Transferase(Phosphotransferase) domain 1 1110 1211 - -
Dere03g2161 1275 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1148 1160 IPR008271 GO:0004672|GO:0006468
Dere03g2161 1275 SUPERFAMILY CAD & PB1 domains 315 404 - -
Dere03g2161 1275 ProSitePatterns Protein kinases ATP-binding region signature. 1029 1050 IPR017441 GO:0005524
Dere03g2161 1275 SMART serkin_6 1023 1261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2161 1275 SMART PB1_new 314 401 IPR000270 GO:0005515
Dere03g2161 1275 CDD STKc_MAP3K-like 1029 1258 - -
Dere03g2161 1275 ProSiteProfiles Protein kinase domain profile. 1023 1274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere03g2161 1275 MobiDBLite consensus disorder prediction 436 459 - -
Dere03g2161 1275 SUPERFAMILY Protein kinase-like (PK-like) 1012 1258 IPR011009 -
Dere03g2161 1275 MobiDBLite consensus disorder prediction 435 484 - -
Dere03g2161 1275 Gene3D - 318 401 - -
Dere03g2161 1275 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1016 1110 - -
Dere03g2161 1275 Gene3D Phosphorylase Kinase; domain 1 1016 1109 - -
Dere03g2161 1275 Pfam PB1 domain 315 398 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2161 Dere-ChrDere03 34189560 34205204 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere03g2161 153 431 MAP Kinase Kinase Kinase AT1G16270 41.219 1.93e-40 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Dere03g2161 PK_Tyr_Ser-Thr 1.6e-37 CL0016