Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2123 ATGGATTCCTCAAGAATTTCTCTCCGACCGTTCAACCCCTCAGACGCCGAAGACGTCCTGAAATGGGCGGGTGACGAGAGAGTGACGCAATACCTGCGATGGAACTCCTTGAGAACCAAAGAAGAAGCTCTGGAATACATAGAGAAGGTCGCAATACCTCATCCATGGCGTCGATCCATATGTTTGGACGATCGCTCCATCGGATACGTGTCGGCGAAGCCGGAGTCCGGCGACGACCGAGTCCGGGCACATGTTAGCTATGCGGTGGGCGTGGAGCACTGGGGACAAGGAATTGTCGCAGAGGCTTTGCGAATGGCTATCCTGGTGATTTTCAAACAGTTCCCTCAGGTGATTAGGGTTGAGGCGTTGGTGGATGAGGAGAATAGAGGGTCTCAGAGGGTGCTTCAGAAAGTAGGGTTTACAAAAGAAGGGTTGCTCAGGAAATATGGGTTTTGTAAGGGTCAGATTAGGGATTTCCTTATCTACAGCTTCTTGACTAGTGATAAGCTTGCGTGA 516 0.5097 MDSSRISLRPFNPSDAEDVLKWAGDERVTQYLRWNSLRTKEEALEYIEKVAIPHPWRRSICLDDRSIGYVSAKPESGDDRVRAHVSYAVGVEHWGQGIVAEALRMAILVIFKQFPQVIRVEALVDEENRGSQRVLQKVGFTKEGLLRKYGFCKGQIRDFLIYSFLTSDKLA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2123 171 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 166 IPR000182 GO:0016747
Dere03g2123 171 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 3 165 IPR016181 -
Dere03g2123 171 Gene3D - 1 165 - -
Dere03g2123 171 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 4 168 - -
Dere03g2123 171 Pfam Acetyltransferase (GNAT) domain 5 141 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2123 Dere-ChrDere03 33357624 33358139 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Dere03g2123 Acetyltransf_3 1.6e-24 CL0257