Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere03g2112 ATGTCTAACATGTTCTCCAAGCACTTTCATCTCTGTTTCTTCAAGCTCAAGTGCCCCACCCCACCACACCCAAAACAATCATCCTCATCATCTCCATCTCCTTCTTCTTCCACCTCCACGTTTCTTTTCAGCGACGACTTCTTTTCCTCCTCTTCCGACTCCGACTCCTGGGACCCCCCTCCGCCGCCGGACTTCGCTTCCGTCTTCGCCTCCCAGCGCTTCTTCTTCTCCTCCCCCGGCCTCTCCAACTCCATCGTCGAGTCCCCCGACACTCGTCCCACCAACGCCACCACCAGCAACCACCATGACACGACGTCGTTAATCCCCAGAGGCGGCGGTGTCGGAGTGCCCAAGTACTCCGTCAACCCCTACGTGGATTTCCGGCGTTCCATGCAGGAAATGATCGAATCCCGGGAATTGGTGGACGTCAGAAAAGACTGGGATTATCTTCACGATCTCCTCTTATGCTATCTTGCCCTCAACCCTTCTCACACCCACAGGTACATCGTTCGAGCTTTCACCGACCTCGTCGTCCAGCTCTTGTCATCTTCGCCGCCGCCGCCGCCGTCATCCTCTCTGCCGGAAAATACCCAAGAACCGCCAGCACAATAA 612 0.5605 MSNMFSKHFHLCFFKLKCPTPPHPKQSSSSSPSPSSSTSTFLFSDDFFSSSSDSDSWDPPPPPDFASVFASQRFFFSSPGLSNSIVESPDTRPTNATTSNHHDTTSLIPRGGGVGVPKYSVNPYVDFRRSMQEMIESRELVDVRKDWDYLHDLLLCYLALNPSHTHRYIVRAFTDLVVQLLSSSPPPPPSSSLPENTQEPPAQ 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere03g2112 203 MobiDBLite consensus disorder prediction 85 106 - -
Dere03g2112 203 ProSiteProfiles OVATE domain profile. 116 179 IPR006458 -
Dere03g2112 203 MobiDBLite consensus disorder prediction 182 203 - -
Dere03g2112 203 Pfam Transcriptional repressor, ovate 120 180 IPR006458 -
Dere03g2112 203 MobiDBLite consensus disorder prediction 85 113 - -
Dere03g2112 203 NCBIfam uncharacterized plant-specific domain TIGR01568 116 182 IPR006458 -
Dere03g2112 203 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 32 182 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere03g2112 Dere-ChrDere03 33251763 33252374 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Dere03g2112 Ovate 1.1e-23 No_clan